RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 AIF1P55008 147 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 P2RX3P56373 397 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 BCAR1P56945 870 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 S100A12P80511 92 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GRIN1Q05586 938 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PCLAFQ15004 111 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 RGS21Q2M5E4 152 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRICKLE4Q2TBC4 344 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CELF3Q5SZQ8 465 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ARMC12Q5T9G4 340 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF425Q6IV72 752 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PSAPL1Q6NUJ1 521 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 C1orf94Q6P1W5 598 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 KLHL35Q6PF15 583 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ERN2Q76MJ5 926 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 RNF44Q7L0R7 432 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 LRRC8DQ7L1W4 858 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SPATA19Q7Z5L4 167 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CCDC103Q8IW40 242 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF295-AS1Q8N0V1 137 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 DAGLBQ8NCG7 672 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 CD300LFQ8TDQ1 290 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 APBB2Q92870 758 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GLG1Q92896 1179 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PMEPA1Q969W9 287 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 TMA16Q96EY4 203 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SAT2Q96F10 170 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 FBXL20Q96IG2 436 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GLT1D1Q96MS3 346 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GDF15Q99988 308 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 C11orf49Q9H6J7 331 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 SMURF1Q9HCE7 757 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 JPH1Q9HDC5 661 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PLA2G3Q9NZ20 509 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 MARCH4Q9P2E8 410 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 MSRAQ9UJ68 235 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 GGA2Q9UJY4 613 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 HCN2Q9UL51 889 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 PPIEQ9UNP9 301 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 EMC9Q9Y3B6 208 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 FRMPD4Q14CM0 1322 aa4.98□□□□□ -1.61
TRAPPC11-208ENST00000511955 A0A087WWV3 80 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 TYW5A2RUC4 315 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 OR2AG2A6NM03 316 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRR23D1E9PI22 279 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 AKAP8O43823 692 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 TOM1L1O75674 476 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 BMP10O95393 424 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 CCNE2O96020 404 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 MT-ND5P03915 603 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 MMP3P08254 477 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 SNRPAP09012 282 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 LINGO3P0C6S8 592 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF888P0CJ79 500 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRR23D2P0DMB1 279 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 GABRB3P28472 473 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 GRNP28799 593 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 CDC25BP30305 580 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 SERPINB8P50452 374 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZP2Q05996 745 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 CLN3Q13286 438 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 LRRC26Q2I0M4 334 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 TRIM60Q495X7 471 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 SPATA46Q5T0L3 261 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC35F1Q5T1Q4 408 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 CST9LP1Q5W188 147 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 WBP2NLQ6ICG8 309 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF365Q70YC5 407 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM228AQ86W67 206 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 SERPINA12Q8IW75 414 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 RHOT2Q8IXI1 618 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ARMC10Q8N2F6 343 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 TBC1D19Q8N5T2 526 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF366Q8N895 744 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ANGPTL6Q8NI99 470 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 WDR48Q8TAF3 677 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ELP5Q8TE02 316 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC20A1Q8WUM9 679 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 NRG4Q8WWG1 115 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 CRYGNQ8WXF5 182 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 CPT1BQ92523 772 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 EDAQ92838 391 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 WNT2BQ93097 391 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 LENG9Q96B70 501 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 RASD2Q96D21 266 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 MTFMTQ96DP5 389 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ELMO2Q96JJ3 720 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 LINC00615Q96LM1 132 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 KCNS3Q9BQ31 491 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 FUZQ9BT04 418 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 PLEKHA4Q9H4M7 779 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 SP110Q9HB58 689 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZFYVE1Q9HBF4 777 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 TRNAU1APQ9NX07 287 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 TAS2R7Q9NYW3 318 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 RCOR3Q9P2K3 495 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 PSMC3IPQ9P2W1 217 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 TRPC4Q9UBN4 977 aa4.97□□□□□ -1.61
TRAPPC11-208ENST00000511955 CTSFQ9UBX1 484 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms