RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ZFP36L1Q07352 338 aaKnown RBP6.65□□□□□ -1.35
COPS4-209ENST00000511653 RALGDSQ12967 914 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 CLCA4Q14CN2 919 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 TBR1Q16650 682 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 UGP2Q16851 508 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 TPD52L1Q16890 204 aaPredicted RBP6.65□□□□□ -1.35
COPS4-209ENST00000511653 ATP13A4Q4VNC1 1196 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 EMC4Q5J8M3 183 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 LVRNQ6Q4G3 990 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 GKN2Q86XP6 184 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 CAMK1DQ8IU85 385 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 CLRN3Q8NCR9 226 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 MSANTD4Q8NCY6 345 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 NTAN1Q96AB6 310 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 PCDHB18PQ96TA0 734 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 SMAD5Q99717 465 aaKnown RBP6.65□□□□□ -1.35
COPS4-209ENST00000511653 NCAPGQ9BPX3 1015 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 FUCA2Q9BTY2 467 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 STK33Q9BYT3 514 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 TMEM168Q9H0V1 697 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 RDH14Q9HBH5 336 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 SAMSN1Q9NSI8 373 aaKnown RBP6.65□□□□□ -1.35
COPS4-209ENST00000511653 TMEM51Q9NW97 253 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 APPL1Q9UKG1 709 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 HEMK1Q9Y5R4 338 aaPredicted RBP6.65□□□□□ -1.35
COPS4-209ENST00000511653 DGKBQ9Y6T7 804 aa6.65□□□□□ -1.35
COPS4-209ENST00000511653 ALG1L2C9J202 215 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 J3KR12 359 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 ACOT7O00154 380 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 SUV39H1O43463 412 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 UNGP13051 313 aaPredicted RBP6.64□□□□□ -1.35
COPS4-209ENST00000511653 CCL4P13236 92 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 PNLIPP16233 465 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 HTR1BP28222 390 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 MAZP56270 477 aaKnown RBP6.64□□□□□ -1.35
COPS4-209ENST00000511653 KIAA1024LP59773 190 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 RAD51Q06609 339 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 SRSF1Q07955 248 aaKnown RBP eCLIP6.64□□□□□ -1.35
COPS4-209ENST00000511653 ITKQ08881 620 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 ELP6Q0PNE2 266 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 MTM1Q13496 603 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 LRP8Q14114 963 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 HLTFQ14527 1009 aaKnown RBP eCLIP6.64□□□□□ -1.35
COPS4-209ENST00000511653 MAP9Q49MG5 647 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 C14orf28Q4W4Y0 310 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 INO80DQ53TQ3 878 aaPredicted RBP6.64□□□□□ -1.35
COPS4-209ENST00000511653 MANEAQ5SRI9 462 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 PHF19Q5T6S3 580 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 SPECC1LQ69YQ0 1117 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 WDR59Q6PJI9 974 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 TAF8Q7Z7C8 310 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 SLFN11Q7Z7L1 901 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 MLKLQ8NB16 471 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 FAM46DQ8NEK8 389 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 PATE1Q8WXA2 126 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 CASKIN2Q8WXE0 1202 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 CELF6Q96J87 481 aaKnown RBP6.64□□□□□ -1.35
COPS4-209ENST00000511653 NUDT22Q9BRQ3 303 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 RETREG1Q9H6L5 497 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 SUDS3Q9H7L9 328 aaPredicted RBP6.64□□□□□ -1.35
COPS4-209ENST00000511653 TAB2Q9NYJ8 693 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 UBA2Q9UBT2 640 aaPredicted RBP6.64□□□□□ -1.35
COPS4-209ENST00000511653 DAAM1Q9Y4D1 1078 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 MED13Q9UHV7 2174 aa6.64□□□□□ -1.35
COPS4-209ENST00000511653 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.63□□□□□ -1.35
COPS4-209ENST00000511653 TCRBV5S1A1TA0A578 114 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 TCRBV5S2A0A599 114 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 TMEM110-MUSTN1A8MSY1 372 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 TMX2-CTNND1H3BSU7 103 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 B4GAT1O43505 415 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 CREB3O43889 395 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 PRAMEF11O60813 436 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 RECQL5O94762 991 aaPredicted RBP6.63□□□□□ -1.35
COPS4-209ENST00000511653 TNFP01375 233 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 S100BP04271 92 aaPredicted RBP6.63□□□□□ -1.35
COPS4-209ENST00000511653 KRT3P12035 628 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 GPD1P21695 349 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 OR1D5P58170 312 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 RPL7AP62424 266 aaKnown RBP6.63□□□□□ -1.35
COPS4-209ENST00000511653 B4GALNT1Q00973 533 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 TLE1Q04724 770 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 AMZ1Q400G9 498 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 PARP15Q460N3 678 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 COLEC12Q5KU26 742 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 ERAP2Q6P179 960 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 SCYL2Q6P3W7 929 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 ATG14Q6ZNE5 492 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 ZNF677Q86XU0 584 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 DNAAF5Q86Y56 855 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 NRROSQ86YC3 692 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 FAM114A1Q8IWE2 563 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 UMODL1-AS1Q8N2C9 162 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 CBARPQ8N350 705 aaPredicted RBP6.63□□□□□ -1.35
COPS4-209ENST00000511653 AGBL5Q8NDL9 886 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 OR6C4Q8NGE1 309 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 OR56A4Q8NGH8 313 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 ABHD4Q8TB40 342 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 DLG3Q92796 817 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 MCEEQ96PE7 176 aa6.63□□□□□ -1.35
COPS4-209ENST00000511653 DPEP2Q9H4A9 486 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms