RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ZSCAN31Q96LW9 406 aaPredicted RBP5.52□□□□□ -1.53
GYPB-212ENST00000511198 ABCG4Q9H172 646 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 EBF2Q9HAK2 575 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 TBC1D22BQ9NU19 505 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 ELOVL5Q9NYP7 299 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 GCNT4Q9P109 453 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 MGAT4CQ9UBM8 478 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 MID2Q9UJV3 735 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 SMC3Q9UQE7 1217 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 U3KQA8 63 aa5.52□□□□□ -1.53
GYPB-212ENST00000511198 PRRC2AP48634 2157 aaKnown RBP5.52□□□□□ -1.53
GYPB-212ENST00000511198 PKDREJQ9NTG1 2253 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 CCDC187A0A096LP49 1063 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 A0A1W2PR77 199 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 VSTM5A8MXK1 200 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 KIF2AO00139 706 aaPredicted RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 RAB27BO00194 218 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 YKT6O15498 198 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 SDC3O75056 442 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 TULP3O75386 442 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 OAZ2O95190 189 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 IGHV4-34P06331 123 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 GIMD1P0DJR0 217 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 KLK2P20151 261 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 PTGER4P35408 488 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 PDX1P52945 283 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 ART1P52961 327 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 NCBP1Q09161 790 aaKnown RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 GALEQ14376 348 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 GBX1Q14549 363 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 DHX8Q14562 1220 aaKnown RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 C4orf46Q504U0 113 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 PRR30Q53SZ7 412 aaPredicted RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 XKR3Q5GH77 459 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 HIST2H2BDQ6DRA6 164 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 DARS2Q6PI48 645 aaKnown RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 TGIF2LYQ8IUE0 185 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 PHC2Q8IXK0 858 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 METTL25Q8N6Q8 603 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 MAPK15Q8TD08 544 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 MRPS31Q92665 395 aaKnown RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 SMR3AQ99954 134 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 FAM118BQ9BPY3 351 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 TMEM79Q9BSE2 394 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 ZNF577Q9BSK1 485 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 TM6SF1Q9BZW5 370 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 SNX15Q9NRS6 342 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 DDX19AQ9NUU7 478 aaKnown RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 SEPT10Q9P0V9 454 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 TCEAL9Q9UHQ7 104 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 RIMKLBQ9ULI2 386 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 G3BP2Q9UN86 482 aaKnown RBP5.51□□□□□ -1.53
GYPB-212ENST00000511198 DAAM1Q9Y4D1 1078 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 CKAP5Q14008 2032 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 TRIP11Q15643 1979 aa5.51□□□□□ -1.53
GYPB-212ENST00000511198 EFCAB7A8K855 629 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 PODXLO00592 558 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 GRID2O43424 1007 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 TMPRSS11DO60235 418 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 JAK2O60674 1132 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 GP1BAP07359 652 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 PCP11498 1178 aaKnown RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 SYT1P21579 422 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 PEX2P28328 305 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 UGT1A5P35504 534 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 LEPRP48357 1165 aaKnown RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 ARRB1P49407 418 aaPredicted RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 COPAP53621 1224 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 DEUP1Q05D60 604 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 STK3Q13188 491 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 LARS2Q15031 903 aaKnown RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 SEC23BQ15437 767 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 PLA2G4FQ68DD2 849 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 PLAG1Q6DJT9 500 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 RBM43Q6ZSC3 357 aaKnown RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 UNC13DQ70J99 1090 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 CACUL1Q86Y37 369 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 ZNF397Q8NF99 534 aaPredicted RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 RUFY2Q8WXA3 655 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 PSPC1Q8WXF1 523 aaKnown RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 COQ8BQ96D53 544 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 ARSGQ96EG1 525 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 SIPA1Q96FS4 1042 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 SEPT5Q99719 369 aaPredicted RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 NUP62CLQ9H1M0 184 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 FAM83DQ9H4H8 585 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 TMEM206Q9H813 350 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 TRPC7Q9HCX4 862 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 GDF3Q9NR23 364 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 PYCARDQ9ULZ3 195 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 CAPN11Q9UMQ6 739 aa5.5□□□□□ -1.53
GYPB-212ENST00000511198 MORC2Q9Y6X9 1032 aaPredicted RBP5.5□□□□□ -1.53
GYPB-212ENST00000511198 TRAV19A0A0A6YYK7 116 aa5.49□□□□□ -1.53
GYPB-212ENST00000511198 SMIM28A0A1B0GU29 152 aa5.49□□□□□ -1.53
GYPB-212ENST00000511198 AQP7P3A6NL99 342 aa5.49□□□□□ -1.53
GYPB-212ENST00000511198 DSCR3O14972 297 aa5.49□□□□□ -1.53
GYPB-212ENST00000511198 NVLO15381 856 aaKnown RBP5.49□□□□□ -1.53
GYPB-212ENST00000511198 NKX2-8O15522 239 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms