RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 FFAR2O15552 330 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 GRIN2CQ14957 1233 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 TRMT5Q32P41 509 aaKnown RBP14.68□□□□□ -0.06
PHF3-209ENST00000509330 FAM78AQ5JUQ0 283 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 LARP4Q71RC2 724 aaKnown RBP eCLIP14.68□□□□□ -0.061e-8■■□□□ 14
PHF3-209ENST00000509330 CPSF7Q8N684 471 aaKnown RBP14.68□□□□□ -0.06
PHF3-209ENST00000509330 VN1R2Q8NFZ6 395 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 NUDT8Q8WV74 236 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 HEPHQ9BQS7 1158 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 EBF2Q9HAK2 575 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 COQ6Q9Y2Z9 468 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 E2F3O00716 465 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 FFAR3O14843 346 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 GPR42O15529 346 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 HNRNPA1P09651 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
PHF3-209ENST00000509330 HTR6P50406 440 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 RALGDSQ12967 914 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 ZRSR2Q15696 482 aaKnown RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 METTL3Q86U44 580 aaKnown RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 FBXW8Q8N3Y1 598 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 FRS2Q8WU20 508 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 ELOVL2Q9NXB9 296 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 GMPR2Q9P2T1 348 aaKnown RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 TMPRSS11EQ9UL52 423 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 INPP4BO15327 924 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 FGF19O95750 216 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 SPINT3P49223 89 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 CCNIQ14094 377 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 KANK2Q63ZY3 851 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 LETMD1Q6P1Q0 360 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 ENDOVQ8N8Q3 282 aaKnown RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 SARDHQ9UL12 918 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 ZNF197O14709 1029 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 XRCC1P18887 633 aaPredicted RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 CCR7P32248 378 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 ERVPABLB-1P60509 514 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 UBE3AQ05086 875 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 GALNT1Q10472 559 aaPredicted RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 TAF11Q15544 211 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 SGO1Q5FBB7 561 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 GPRC6AQ5T6X5 926 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 CELF5Q8N6W0 485 aaKnown RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 FGF13Q92913 245 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 FOXJ1Q92949 421 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 ISG20Q96AZ6 181 aaKnown RBP14.67□□□□□ -0.06
PHF3-209ENST00000509330 LRCH3Q96II8 777 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 WWOXQ9NZC7 414 aa14.67□□□□□ -0.06
PHF3-209ENST00000509330 S100BP04271 92 aaPredicted RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 PRDX6P30041 224 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 RGS4P49798 205 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 ADARP55265 1226 aaKnown RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 STX1BP61266 288 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 RPS6KA2Q15349 733 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 MUM1Q2TAK8 710 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 VPS26BQ4G0F5 336 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 WLSQ5T9L3 541 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 BNC2Q6ZN30 1099 aaPredicted RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 EP400NLQ6ZTU2 488 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 GPRIN3Q6ZVF9 776 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 VRK3Q8IV63 474 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 NPAS3Q8IXF0 933 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 ZNF570Q96NI8 536 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 TUBGCP5Q96RT8 1024 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 EFCAB1Q9HAE3 211 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 RWDD3Q9Y3V2 267 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 HELZP42694 1942 aaKnown RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 C5orf67F2Z3F1 127 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 FBP2O00757 339 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 CAPN1P07384 714 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 CASP2P42575 452 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 INHBCP55103 352 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 SATB1Q01826 763 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 SLC34A1Q06495 639 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 CEACAM7Q14002 265 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 GRM2Q14416 872 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 SQLEQ14534 574 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 REP15Q6BDI9 236 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 GOLGA7Q7Z5G4 137 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 OR2T11Q8NH01 316 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 PYCR2Q96C36 320 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 MCCC1Q96RQ3 725 aaPredicted RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 HTATIP2Q9BUP3 242 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 RIOK2Q9BVS4 552 aaKnown RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 MRPL1Q9BYD6 325 aaKnown RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 PBX4Q9BYU1 374 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 CPEB1Q9BZB8 566 aaKnown RBP14.66□□□□□ -0.06
PHF3-209ENST00000509330 NMRK1Q9NWW6 199 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 IL36AQ9UHA7 158 aa14.66□□□□□ -0.06
PHF3-209ENST00000509330 GBF1Q92538 1859 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 TRBV5-4A0A0C4DH59 114 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 EPOPA6NHQ4 379 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 PFKLP17858 780 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 DGKAP23743 735 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 HOXA9P31269 272 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 NSG1P42857 185 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 FNDC3BQ53EP0 1204 aaKnown RBP14.65□□□□□ -0.06
PHF3-209ENST00000509330 PGM2L1Q6PCE3 622 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 C16orf89Q6UX73 402 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 LRRC74BQ6ZQY2 392 aa14.65□□□□□ -0.06
PHF3-209ENST00000509330 CHSY3Q70JA7 882 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms