RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	PLSCR4	Q9NRQ2	329 aa		4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	C20orf141	Q9NUB4	165 aa		4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	RRN3	Q9NYV6	651 aa		4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	CTNNAL1	Q9UBT7	734 aa		4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	SLC9A2	Q9UBY0	812 aa		4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	CARD8	Q9Y2G2	431 aa		4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	ROBO3	Q96MS0	1386 aa		4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	SMG1	Q96Q15	3661 aa	Known RBP	4.1	□□□□□ -1.75
NFKB1-208	ENST00000509165	IGSF10	Q6WRI0	2623 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	HECTD1	Q9ULT8	2610 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	LOC102724159	A0A0B4J2E5	919 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	NCAM2	O15394	837 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	HOXC11	O43248	304 aa	Predicted RBP	4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ZIC3	O60481	467 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	TACC1	O75410	805 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	GALT	P07902	379 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	CLTB	P09497	229 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	MX1	P20591	662 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	AGA	P20933	346 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	HNRNPH1	P31943	449 aa	Known RBP	4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	SNTA1	Q13424	505 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	TNFAIP1	Q13829	316 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	PWP2	Q15269	919 aa	Known RBP	4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	PRICKLE4	Q2TBC4	344 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	SGO1	Q5FBB7	561 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	TXNDC8	Q6A555	127 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ANKRD54	Q6NXT1	300 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	SLC22A25	Q6T423	547 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165		Q6ZTC4	211 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	CUZD1	Q86UP6	607 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ZC3HC1	Q86WB0	502 aa	Known RBP	4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	NR2C2AP	Q86WQ0	139 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	CERS3	Q8IU89	383 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ADSSL1	Q8N142	457 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	KBTBD3	Q8NAB2	608 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	MYRIP	Q8NFW9	859 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ZCCHC10	Q8TBK6	192 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	NEUROD6	Q96NK8	337 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	HEMGN	Q9BXL5	484 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	NUF2	Q9BZD4	464 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ESRP2	Q9H6T0	727 aa	Known RBP	4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	SLC28A3	Q9HAS3	691 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	PAG1	Q9NWQ8	432 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	CISD1	Q9NZ45	108 aa	Known RBP	4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	MUTYH	Q9UIF7	546 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	SLCO3A1	Q9UIG8	710 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	ICAM5	Q9UMF0	924 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	TENM4	Q6N022	2769 aa		4.09	□□□□□ -1.75
NFKB1-208	ENST00000509165	MAGEA13P	A6NCF6	341 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	CXCL11	O14625	94 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	LDB3	O75112	727 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	NDUFS7	O75251	213 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZMYM6	O95789	1325 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	LDHC	P07864	332 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	ETFA	P13804	333 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	DLX5	P56178	289 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	GSTO1	P78417	241 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	ECT2L	Q008S8	904 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	GABPA	Q06546	454 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	CAMK1	Q14012	370 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	FAM76B	Q5HYJ3	339 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	NAA35	Q5VZE5	725 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	WBP2NL	Q6ICG8	309 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	MTSS1L	Q765P7	747 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	DHX40	Q8IX18	779 aa	Known RBP	4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	SPATA22	Q8NHS9	363 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	FAM151A	Q8WW52	585 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	HTRA1	Q92743	480 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	USP13	Q92995	863 aa	Predicted RBP	4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	BICD1	Q96G01	975 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	IGSF21	Q96ID5	467 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	OR1F2P	Q96R84	312 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	FSD1	Q9BTV5	496 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	SPRY4	Q9C004	299 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	PLEKHA4	Q9H4M7	779 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	RETREG1	Q9H6L5	497 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	DNAJC18	Q9H819	358 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	UBE2Z	Q9H832	354 aa	Predicted RBP	4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	NOX4	Q9NPH5	578 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	CDC14A	Q9UNH5	594 aa		4.08	□□□□□ -1.76
NFKB1-208	ENST00000509165	PTPRS	Q13332	1948 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	PLIN4	Q96Q06	1357 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	FLT1	P17948	1338 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZNF532	Q9HCE3	1301 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165		A0A087WYN8	130 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165		A0A1W2PQM1	296 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	hDV102S1	A0JD36	115 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	TMEM221	A6NGB7	291 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165		M0R296	226 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	TULP2	O00295	520 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	KDM4B	O94953	1096 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	CLDN14	O95500	239 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	PMS2P2	O95744	297 aa		4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	MT-CYB	P00156	380 aa	Predicted RBP	4.07	□□□□□ -1.76
NFKB1-208	ENST00000509165	ZFY	P08048	801 aa	Predicted RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms