RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 ZNF30P17039 623 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CR2P20023 1033 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CD247P20963 164 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 IL1R2P27930 398 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 PDX1P52945 283 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 EPHB1P54762 984 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 UBASH3AP57075 661 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 SLC25A11Q02978 314 aaKnown RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 IQCB1Q15051 598 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CNGA3Q16281 694 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CLPPQ16740 277 aaPredicted RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CCDC122Q5T0U0 273 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 LCE4AQ5TA78 99 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 SPECC1LQ69YQ0 1117 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 RAET1GQ6H3X3 334 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 SPRED1Q7Z699 444 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 FBXO39Q8N4B4 442 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 PLA2G15Q8NCC3 412 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 TMEM52Q8NDY8 209 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 NUP43Q8NFH3 380 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 GPR156Q8NFN8 814 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 ZNF564Q8TBZ8 553 aaPredicted RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CTNNBL1Q8WYA6 563 aaPredicted RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 OR1E3Q8WZA6 343 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 FATE1Q969F0 183 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 SCRN2Q96FV2 425 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 COQ10AQ96MF6 247 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 NAP1L5Q96NT1 182 aaPredicted RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 MCCC1Q96RQ3 725 aaPredicted RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CMKLR1Q99788 373 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 ZNF670Q9BS34 389 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 SLC12A9Q9BXP2 914 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 THAP2Q9H0W7 228 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 LRRN3Q9H3W5 708 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 CAAP1Q9H8G2 361 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 NOD2Q9HC29 1040 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 TRNAU1APQ9NX07 287 aaKnown RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 SEPT10Q9P0V9 454 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 UVRAGQ9P2Y5 699 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 LUC7L2Q9Y383 392 aaKnown RBP7.4□□□□□ -1.22
CCSER1-208ENST00000509109 TTLL3Q9Y4R7 772 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 RAI2Q9Y5P3 530 aa7.4□□□□□ -1.22
CCSER1-208ENST00000509109 UNC13CQ8NB66 2214 aa7.4□□□□□ -1.23
CCSER1-208ENST00000509109 SPTA1P02549 2419 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 COL6A6A6NMZ7 2263 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 AHCTF1Q8WYP5 2266 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ARHGEF17Q96PE2 2063 aaPredicted RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ZFC3H1O60293 1989 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 SCN8AQ9UQD0 1980 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 SYCE3A1L190 88 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 NPIPB15A6NHN6 443 aaPredicted RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 RHPN2P1A8MT19 583 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 A8MX80 341 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CPNE6O95741 557 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 PEX11BO96011 259 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CYP1A2P05177 515 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 IVLP07476 585 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CCNB1P14635 433 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ENDOUP21128 410 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CD82P27701 267 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 GARSP41250 739 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 GNPDA1P46926 289 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 MAXP61244 160 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 RPL26P61254 145 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CCL7P80098 99 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CDK3Q00526 305 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 DPTQ07507 201 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ITKQ08881 620 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 GALNT2Q10471 571 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 TRAF2Q12933 501 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 TRIM14Q14142 442 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 HLTFQ14527 1009 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 PDK2Q15119 407 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ZFYVE27Q5T4F4 411 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ARHGAP40Q5TG30 622 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 DENND2CQ68D51 928 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ALKBH5Q6P6C2 394 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 LUZP1Q86V48 1076 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 JAMLQ86YT9 394 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 RAVER1Q8IY67 606 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CCDC112Q8NEF3 446 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 SNRNP27Q8WVK2 155 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 JMJD8Q96S16 334 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 SEMA3CQ99985 751 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 TEX101Q9BY14 249 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 TMEM168Q9H0V1 697 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 DEF6Q9H4E7 631 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 STN1Q9H668 368 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CPNE5Q9HCH3 593 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 NT5MQ9NPB1 228 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 MRPL40Q9NQ50 206 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 LRIT1Q9P2V4 623 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 IMPACTQ9P2X3 320 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 ACSL6Q9UKU0 697 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 CAPN11Q9UMQ6 739 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 RPL26L1Q9UNX3 145 aaKnown RBP7.39□□□□□ -1.23
CCSER1-208ENST00000509109 LOXL2Q9Y4K0 774 aa7.39□□□□□ -1.23
CCSER1-208ENST00000509109 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms