RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 DNAJC16Q9Y2G8 782 aa9.2□□□□□ -0.94
NEDD9-211ENST00000508546 TACC2O95359 2948 aa9.2□□□□□ -0.94
NEDD9-211ENST00000508546 DCHS2Q6V1P9 2916 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TLCD2A6NGC4 264 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF185O15231 689 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 MATN3O15232 486 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 VEGFDO43915 354 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 SCRG1O75711 98 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 KLK3P07288 261 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-211ENST00000508546 FERP16591 822 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 IDSP22304 550 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 IL4RP24394 825 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF165P49910 485 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TUBB4BP68371 445 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 HSD11B2P80365 405 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 GALNT2Q10471 571 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TUBB2AQ13885 445 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 SEPT7Q16181 437 aaKnown RBP9.19□□□□□ -0.94
NEDD9-211ENST00000508546 QPCTQ16769 361 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 SMTNL2Q2TAL5 461 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 CRB2Q5IJ48 1285 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 PLEKHS1Q5SXH7 462 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF648Q5T619 568 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-211ENST00000508546 VWA5B1Q5TIE3 1220 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TIGD7Q6NT04 549 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-211ENST00000508546 IRF2BP2Q7Z5L9 587 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TMEM126BQ8IUX1 230 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF547Q8IVP9 402 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 DSELQ8IZU8 1212 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 CARFQ8N187 725 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TRAM1L1Q8N609 369 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 SLC38A9Q8NBW4 561 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TEKT4Q8WW24 435 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF501Q96CX3 271 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-211ENST00000508546 EID2BQ96D98 161 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TSGA13Q96PP4 275 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 RANBP9Q96S59 729 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 MAP3K3Q99759 626 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TUBB2BQ9BVA1 445 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 CLSTN2Q9H4D0 955 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 PCDH18Q9HCL0 1135 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 KCND1Q9NSA2 647 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEDD9-211ENST00000508546 DTLQ9NZJ0 730 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 TCFL5Q9UL49 500 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 SNX7Q9UNH6 387 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 B3GNT3Q9Y2A9 372 aa9.19□□□□□ -0.94
NEDD9-211ENST00000508546 A6NL46 340 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 LGALS16A8MUM7 142 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 TMCO5BA8MYB1 307 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 MEN1O00255 615 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 KCNJ13O60928 360 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 CAPN1P07384 714 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 RARAP10276 462 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 GZMAP12544 262 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 VCLP18206 1134 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 CCNCP24863 283 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 HALP42357 657 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ARL4DP49703 201 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 DRG2P55039 364 aaKnown RBP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 NIPAL4Q0D2K0 466 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ELOAQ14241 798 aaKnown RBP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 IFI16Q16666 785 aaKnown RBP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 PLA2G4EQ3MJ16 856 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 IGFL3Q6UXB1 125 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 SPNS3Q6ZMD2 512 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 CERS6Q6ZMG9 384 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 C11orf96Q7Z7L8 435 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 CISD2Q8N5K1 135 aaKnown RBP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ZBTB2Q8N680 514 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ENDOVQ8N8Q3 282 aaKnown RBP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 GPR26Q8NDV2 337 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 HSPH1Q92598 858 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ERGIC2Q96RQ1 377 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 NUP85Q9BW27 656 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ADGRE3Q9BY15 652 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 ZFYVE1Q9HBF4 777 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 RAD18Q9NS91 495 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 RBM22Q9NW64 420 aaKnown RBP eCLIP9.18□□□□□ -0.94
NEDD9-211ENST00000508546 WDR37Q9Y2I8 494 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 SCINQ9Y6U3 715 aa9.18□□□□□ -0.94
NEDD9-211ENST00000508546 UBA6A0AVT1 1052 aaPredicted RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 OR5K3A6NET4 321 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 MFSD11O43934 449 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 KLHL41O60662 606 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 CDK14O94921 469 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 FTLP02792 175 aaPredicted RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 HLA-DQB2P05538 268 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 MMP2P08253 660 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 TCF4P15884 667 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 RORAP35398 523 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 PER3P56645 1201 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 DMPKQ09013 629 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 PAFAH1B3Q15102 231 aaKnown RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 GPR19Q15760 415 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 KHDC1Q4VXA5 237 aaKnown RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 DNTTIP2Q5QJE6 756 aaKnown RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 ALS2CLQ60I27 953 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms