RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CNPY3Q9BT09 278 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 TTYH3Q9C0H2 523 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 RSPH9Q9H1X1 276 aaPredicted RBP4.61□□□□□ -1.67
NUP54-206ENST00000508465 TSPY26PQ9H489 355 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 PARVAQ9NVD7 372 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 FBXL12Q9NXK8 326 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 DDX56Q9NY93 547 aaKnown RBP4.61□□□□□ -1.67
NUP54-206ENST00000508465 DLL3Q9NYJ7 618 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 WSB2Q9NYS7 404 aaPredicted RBP4.61□□□□□ -1.67
NUP54-206ENST00000508465 VPS51Q9UID3 782 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 SARDHQ9UL12 918 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 CAPN11Q9UMQ6 739 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 TBC1D30Q9Y2I9 924 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 PCDHGA5Q9Y5G8 931 aa4.61□□□□□ -1.67
NUP54-206ENST00000508465 NUMA1Q14980 2115 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 IGLV3-10A0A075B6K4 115 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 A0A087X0T9 212 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 A0A1B0GTW7 788 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 A0A1B0GVT2 93 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 LNP1A1A4G5 178 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 TARSL2A2RTX5 802 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 MEI4A8MW99 385 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 SLC30A4O14863 429 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 MGST3O14880 152 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 CREB3O43889 395 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 RNASEH1O60930 286 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 PHF2O75151 1096 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 RTN2O75298 545 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 SEMA4FO95754 770 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 DNTTP04053 509 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 SERPING1P05155 500 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 FAM228BP0C875 321 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 SRCP12931 536 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 TCF4P15884 667 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ENGP17813 658 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PTMSP20962 102 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 CTSSP25774 331 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PSMA2P25787 234 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 MAT2AP31153 395 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 CASP14P31944 242 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 GKP32189 559 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PTPN7P35236 360 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 NNMTP40261 264 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PTPN9P43378 593 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ADKP55263 362 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 PHC1P78364 1004 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZBED6P86452 979 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 BNC1Q01954 994 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 OCRLQ01968 901 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 GNA12Q03113 381 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 GFPT1Q06210 699 aaPredicted RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 CNTN1Q12860 1018 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 SQSTM1Q13501 440 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 SLC12A1Q13621 1099 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 E2F5Q15329 346 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 CST6Q15828 149 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 CA9Q16790 459 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 DUOXA1Q1HG43 343 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ARL13BQ3SXY8 428 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 KCNT1Q5JUK3 1230 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZNF776Q68DI1 518 aaPredicted RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 IL31Q6EBC2 164 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PLEKHA7Q6IQ23 1121 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 NCEH1Q6PIU2 408 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 FRMD7Q6ZUT3 714 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ARCQ7LC44 396 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 STRADAQ7RTN6 431 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 C11orf74Q86VG3 221 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZCCHC9Q8N567 271 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 C3orf20Q8ND61 904 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 OR6K2Q8NGY2 324 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZNF480Q8WV37 535 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 BIRC7Q96CA5 298 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZNF653Q96CK0 615 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ARHGEF26Q96DR7 871 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PTCD3Q96EY7 689 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 VCPIP1Q96JH7 1222 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZNF778Q96MU6 729 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 CAMK1GQ96NX5 476 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PEBP4Q96S96 227 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 EDEM2Q9BV94 578 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 NUSAP1Q9BXS6 441 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 EDEM3Q9BZQ6 932 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZYG11BQ9C0D3 744 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PABPC3Q9H361 631 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 DHX35Q9H5Z1 703 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 CAAP1Q9H8G2 361 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 EBF2Q9HAK2 575 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 IL21RQ9HBE5 538 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ZNF212Q9UDV6 495 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 CNOT8Q9UFF9 292 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 SLC25A13Q9UJS0 675 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 FZD10Q9ULW2 581 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 MYO6Q9UM54 1294 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 NCKAP1Q9Y2A7 1128 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 LUC7L2Q9Y383 392 aaKnown RBP4.6□□□□□ -1.67
NUP54-206ENST00000508465 DAAM1Q9Y4D1 1078 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 PAXBP1Q9Y5B6 917 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 ITIH6Q6UXX5 1313 aa4.6□□□□□ -1.67
NUP54-206ENST00000508465 SPAG17Q6Q759 2223 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms