RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GALNT7Q86SF2 657 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM110Q86TL2 294 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 IFNEQ86WN2 208 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 ETFBKMTQ8IXQ9 262 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CHTF18Q8WVB6 975 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 UBE2E3Q969T4 207 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 RBBP8Q99708 897 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 HNRNPABQ99729 332 aaKnown RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 FRMD8Q9BZ67 464 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 KCTD10Q9H3F6 313 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 C19orf25Q9UFG5 118 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-208ENST00000508342 CCL26Q9Y258 94 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TBC1D30Q9Y2I9 924 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 DUSP10Q9Y6W6 482 aa2.93□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM114B3SHH9 223 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MCIDASD6RGH6 385 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NDUFS8O00217 210 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CRTAPO75718 401 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PRKCGP05129 697 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RPLP1P05386 114 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HBQ1P09105 142 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 UGT1A1P22309 533 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CASP9P55211 416 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 EIF3BP55884 814 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FOXO1Q12778 655 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ITGA9Q13797 1035 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MYBPC3Q14896 1274 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NTRK3Q16288 839 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF805Q5CZA5 627 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 BEND6Q5SZJ8 279 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FBXO38Q6PIJ6 1188 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CEACAM20Q6UY09 585 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PIM3Q86V86 326 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 OSTM1Q86WC4 334 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM105Q8N8V8 129 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C1orf127Q8N9H9 656 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PHC3Q8NDX5 983 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HEXDCQ8WVB3 486 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 LCN9Q8WX39 176 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MFSD3Q96ES6 412 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FCRL2Q96LA5 508 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C12orf66Q96MD2 445 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CLCC1Q96S66 551 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 THUMPD3Q9BV44 507 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KLC4Q9NSK0 619 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CATSPERZQ9NTU4 200 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PAK5Q9P286 719 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SHOC2Q9UQ13 582 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TTLL8A6PVC2 850 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 H0Y8G0 127 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC188H7C350 402 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KPNA5O15131 536 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KRT6AP02538 564 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KRT6BP04259 564 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CLUP10909 449 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AMPD1P23109 780 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KRT6CP48668 564 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GDI2P50395 445 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CCNG1P51959 295 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MEA1Q16626 185 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 LONRF1Q17RB8 773 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC142Q17RM4 750 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HLA-BQ31612 363 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF528Q3MIS6 628 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 P3H2Q8IVL5 708 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GSPT2Q8IYD1 628 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM156Q8N614 296 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TM9SF4Q92544 642 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KCNJ9Q92806 393 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 INPP5DQ92835 1189 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FAM162AQ96A26 154 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RAB7BQ96AH8 199 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 THOC1Q96FV9 657 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 LOXL4Q96JB6 756 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 WDR92Q96MX6 357 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SLC46A2Q9BY10 475 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RNF121Q9H920 327 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 UBP1Q9NZI7 540 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CIDEBQ9UHD4 219 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 DRG1Q9Y295 367 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GREB1LQ9C091 1923 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 A0A0G2JND7 137 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NCF1BA6NI72 391 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NCF1CA8MVU1 366 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PPP1R3GB7ZBB8 358 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 M0QZQ0 153 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 WNT9AO14904 365 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RFPL1O75677 317 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TRAPPC6AO75865 159 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KCNK5O95279 499 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SCGB1D2O95969 90 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FAM163BP0C2L3 166 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NCF1P14598 390 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KLK7P49862 253 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SLC7A2P52569 658 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RELQ04864 619 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TCTN1Q2MV58 587 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 INO80DQ53TQ3 878 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PIK3R6Q5UE93 754 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms