RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 BTBD6Q96KE9 485 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 EIF3CQ99613 913 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 MAP3K3Q99759 626 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 TDRD1Q9BXT4 1180 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 SLC7A5P2Q9GIP4 190 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 ILKAPQ9H0C8 392 aaPredicted RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 CARD9Q9H257 536 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 CHST8Q9H2A9 424 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 RMI1Q9H9A7 625 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 PCDH18Q9HCL0 1135 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 POT1Q9NUX5 634 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 ASF1BQ9NVP2 202 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 FANCLQ9NW38 375 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 GPR83Q9NYM4 423 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 DNPEPQ9ULA0 475 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 SLC5A6Q9Y289 635 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 PPIL1Q9Y3C6 166 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 PCDHGA6Q9Y5G7 932 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 CFAP20Q9Y6A4 193 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 RP1L1Q8IWN7 2480 aaPredicted RBP5.65□□□□□ -1.51
GYPB-208ENST00000507009 MED13Q9UHV7 2174 aa5.65□□□□□ -1.51
GYPB-208ENST00000507009 SLC35F4A4IF30 521 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 OR6C74A6NCV1 312 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ANKUB1A6NFN9 424 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 TOX3O15405 576 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 FZD6O60353 706 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 CPNE3O75131 537 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 CDK14O94921 469 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 FTLP02792 175 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 HLA-DQB2P05538 268 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 KLK3P07288 261 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 CD48P09326 243 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 CCDC172P0C7W6 258 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 RARAP10276 462 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 XRCC1P18887 633 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 POU3F2P20265 443 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 CDK11BP21127 795 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 IDSP22304 550 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ELAVL4P26378 380 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 GLRBP48167 497 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 HCAR3P49019 387 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ITGA1P56199 1179 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ACY1Q03154 408 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 NIPAL4Q0D2K0 466 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 GPS2Q13227 327 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ATP1A4Q13733 1029 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 GTF2H3Q13889 308 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ASIC2Q16515 512 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 PTCHD3Q3KNS1 767 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 PLEKHN1Q494U1 663 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 KHDC1Q4VXA5 237 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 RALGPS1Q5JS13 557 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ZFYVE27Q5T4F4 411 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 PLEKHA7Q6IQ23 1121 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 LCN10Q6JVE6 187 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ARMC6Q6NXE6 501 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 DUS1LQ6P1R4 473 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 PSTKQ8IV42 348 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 IQCKQ8N0W5 287 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 AOPEPQ8N6M6 819 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 RBMXL3Q8N7X1 1067 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 GPR26Q8NDV2 337 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ANKRD20A12PQ8NF67 263 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 NANOS1Q8WY41 292 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 SEC14L1Q92503 715 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 UBXN4Q92575 508 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 GLYATL1Q969I3 302 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 MOCOSQ96EN8 888 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 SGSM3Q96HU1 749 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ZNF514Q96K75 400 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 TTC25Q96NG3 672 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 RANBP9Q96S59 729 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 INSM2Q96T92 566 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 TLR10Q9BXR5 811 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 GPR87Q9BY21 358 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 CEP41Q9BYV8 373 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 GPR63Q9BZJ6 419 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 NUP62CLQ9H1M0 184 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ZNF395Q9H8N7 513 aaPredicted RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 UCK1Q9HA47 277 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 TRIM39Q9HCM9 518 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 BPIFA1Q9NP55 256 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 SLC40A1Q9NP59 571 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 WASH6PQ9NQA3 447 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 IMP3Q9NV31 184 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 HAUS2Q9NVX0 235 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 ITGB1BP2Q9UKP3 347 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 WDR37Q9Y2I8 494 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 PCDHGA9Q9Y5G4 932 aaKnown RBP5.64□□□□□ -1.51
GYPB-208ENST00000507009 SCINQ9Y6U3 715 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 CROCCQ5TZA2 2017 aa5.64□□□□□ -1.51
GYPB-208ENST00000507009 GOLGA6L3A6NEY3 463 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 LRRC53A6NM62 1247 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 LGALS16A8MUM7 142 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 KCNK1O00180 336 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 MASP2O00187 686 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 MATN3O15232 486 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 LDB2O43679 373 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 LCA5LO95447 670 aa5.63□□□□□ -1.51
GYPB-208ENST00000507009 PRLP01236 227 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms