RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 FRS2Q8WU20 508 aa17.03■□□□□ 0.32
TRAPPC11-204ENST00000505676 HOPXQ9BPY8 73 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC11-204ENST00000505676 SPAG4Q9NPE6 437 aa17.03■□□□□ 0.32
TRAPPC11-204ENST00000505676 B4GALT6Q9UBX8 382 aa17.03■□□□□ 0.32
TRAPPC11-204ENST00000505676 LRRC14BA6NHZ5 514 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 IQCF5A8MTL0 148 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 UPK3BL1B0FP48 263 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 UPK3BL2E5RIL1 263 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 SLC16A5O15375 505 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 TRIM16O95361 564 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 C1SP09871 688 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 MPC1LP0DKB6 136 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 SESN3P58005 492 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 PSME3P61289 254 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 TRAP1Q12931 704 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 SP140Q13342 867 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 RPS6KA2Q15349 733 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 NEK10Q6ZWH5 1172 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 DHDDSQ86SQ9 333 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 OSCP1Q8WVF1 389 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 ZNF707Q96C28 371 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 CCDC124Q96CT7 223 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 C3orf30Q96M34 536 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 KLHL32Q96NJ5 620 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 BOCQ9BWV1 1114 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 CCDC167Q9P0B6 97 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 C6orf203Q9P0P8 240 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 SLCO3A1Q9UIG8 710 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 GRXCR2A6NFK2 248 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 NCF1BA6NI72 391 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 NCF1CA8MVU1 366 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 MRASO14807 208 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 ARHGEF15O94989 841 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 C8GP07360 202 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 HGFP14210 728 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 NCF1P14598 390 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 UGT1A6P19224 532 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 UGT1A1P22309 533 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 UGT1A4P22310 534 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 LHCGRP22888 699 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 UGT1A3P35503 534 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 UGT1A5P35504 534 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 CAMK1Q14012 370 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 DHCR24Q15392 516 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 PDCD4Q53EL6 469 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 SAMD4BQ5PRF9 694 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 PLEKHS1Q5SXH7 462 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 GALNT13Q8IUC8 556 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 HMGCLL1Q8TB92 370 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 ASB9Q96DX5 294 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 MRGPRX3Q96LB0 322 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 MAGEB10Q96LZ2 347 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 TRIM54Q9BYV2 358 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 LINC00597Q9H2U6 94 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 TUBB1Q9H4B7 451 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 PIDD1Q9HB75 910 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 GID8Q9NWU2 228 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 EIF2B4Q9UI10 523 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 CROTQ9UKG9 612 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 LRCH1Q9Y2L9 728 aa17.02■□□□□ 0.32
TRAPPC11-204ENST00000505676 PSMD11O00231 422 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 LIN7AO14910 233 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 BCAS2O75934 225 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 WDR47O94967 919 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ALDOCP09972 364 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ADH5P11766 374 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 CEBPBP17676 345 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 IRS1P35568 1242 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 MAPK9P45984 424 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 DGKGP49619 791 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 LBX1P52954 281 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 FOXA1P55317 472 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ST8SIA6P61647 398 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ERVK-8P63133 956 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 GTF2H2Q13888 395 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 FLOT2Q14254 428 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 GTF2H2CQ6P1K8 395 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 TRAM1L1Q8N609 369 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 DCUN1D1Q96GG9 259 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 NPAS2Q99743 824 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 BRINP2Q9C0B6 783 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 DUS2Q9NX74 493 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 OBP2AQ9NY56 170 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZIM2Q9NZV7 527 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 IL36AQ9UHA7 158 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 WNT6Q9Y6F9 365 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 PRSS21Q9Y6M0 314 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 NUP210Q8TEM1 1887 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 BRCA2P51587 3418 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 A0A0U1RQS6 177 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 GPR39O43194 453 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 BNIP3LO60238 219 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 KATNA1O75449 491 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 STAMBPO95630 424 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 NFATC1O95644 943 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 AGTR2P50052 363 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 THOP1P52888 689 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 GBX1Q14549 363 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZNF805Q5CZA5 627 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 TCHHL1Q5QJ38 904 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms