RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 UGT1A9O60656 530 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 MFAP3LO75121 409 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 KIAA0754O94854 1291 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 ZRANB2O95218 330 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNCA-207ENST00000502987 NDUFA10O95299 355 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 C9P02748 559 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 ANKRD34CP0C6C1 535 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 UGT1A6P19224 532 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 UGT1A1P22309 533 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 UGT1A4P22310 534 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 AKT1P31749 480 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 HMGCLP35914 325 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SPAM1P38567 509 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 CDKN2BP42772 138 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 MAGEA1P43355 309 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 CHRNA4P43681 627 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SH3BP2P78314 561 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 ERV3-1Q14264 604 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 GPR18Q14330 331 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 IL11RAQ14626 422 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 PLCL1Q15111 1095 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 PRKD1Q15139 912 aaPredicted RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 CHRNA6Q15825 494 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SLC14A2Q15849 920 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SKOR2Q2VWA4 1001 aaPredicted RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 KHDC1Q4VXA5 237 aaKnown RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 LDLRAP1Q5SW96 308 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 TMEM220Q6QAJ8 160 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 ABRAXAS1Q6UWZ7 409 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 FAM151BQ6UXP7 276 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SPOCD1Q6ZMY3 1216 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 GLT6D1Q7Z4J2 308 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 CNGA4Q8IV77 575 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 ZNF547Q8IVP9 402 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 VSTM4Q8IW00 320 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 RBM12BQ8IXT5 1001 aaKnown RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 TTC30BQ8N4P2 665 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SIDT2Q8NBJ9 832 aaKnown RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 C9orf43Q8TAL5 461 aaPredicted RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 APOBEC4Q8WW27 367 aaKnown RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 TADA1Q96BN2 335 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 FSD1LQ9BXM9 530 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 TSPY26PQ9H489 355 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 TRABDQ9H4I3 376 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 UGT1A7Q9HAW7 530 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 UGT1A10Q9HAW8 530 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 UGT1A8Q9HAW9 530 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SLC40A1Q9NP59 571 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 POT1Q9NUX5 634 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNCA-207ENST00000502987 HACD3Q9P035 362 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 TUBD1Q9UJT1 453 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 INTUQ9ULD6 942 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNCA-207ENST00000502987 MRPS18BQ9Y676 258 aaKnown RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 GLYATL1P3A0A0U1RQE8 302 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 OR2AG2A6NM03 316 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 H7C0C1 242 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 STX7O15400 261 aaKnown RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 TOX3O15405 576 aaPredicted RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 PSTPIP1O43586 416 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 KCNJ13O60928 360 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 SPAG6O75602 509 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 POP7O75817 140 aaKnown RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 DLGAP3O95886 979 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 BRAFP15056 766 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 PECAM1P16284 738 aaPredicted RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 ZNF28P17035 718 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 MSH3P20585 1137 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 OAS2P29728 719 aaKnown RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 CD68P34810 354 aaPredicted RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 STAT5AP42229 794 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 ATP5OP48047 213 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 XRCC4Q13426 336 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 TFDP3Q5H9I0 405 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 ATP1A1-AS1Q5TC04 95 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 AGAP9Q5VTM2 703 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 CYB5D1Q6P9G0 228 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 KLHL35Q6PF15 583 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 KDELC1Q6UW63 502 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 WASH2PQ6VEQ5 465 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 DET1Q7L5Y6 550 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 PPP1R3BQ86XI6 285 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 RCOR2Q8IZ40 523 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 ZNF567Q8N184 647 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 RSC1A1Q92681 617 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 FERMT1Q9BQL6 677 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 HEMGNQ9BXL5 484 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 SLC6A16Q9GZN6 736 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 ZNF768Q9H5H4 540 aaKnown RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 PDE7BQ9NP56 450 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 IL26Q9NPH9 171 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 WASH6PQ9NQA3 447 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 SIDT1Q9NXL6 827 aaKnown RBP10.52□□□□□ -0.73
SNCA-207ENST00000502987 FAM8A1Q9UBU6 413 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 RSPH14Q9UHP6 348 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 CROTQ9UKG9 612 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 TMPRSS11EQ9UL52 423 aa10.52□□□□□ -0.73
SNCA-207ENST00000502987 WDR37Q9Y2I8 494 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms