RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 AKAP17AQ02040 695 aaKnown RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 RNPS1Q15287 305 aaKnown RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 WHAMMP3Q1A5X7 153 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 IZUMO4Q1ZYL8 232 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 XKR9Q5GH70 373 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 TEX35Q5T0J7 233 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 C15orf52Q6ZUT6 534 aaKnown RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 TMTC3Q6ZXV5 915 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 GSTA5Q7RTV2 222 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 ZNF713Q8N859 430 aaPredicted RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 MNS1Q8NEH6 495 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 ANKRD20A12PQ8NF67 263 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 TMED6Q8WW62 240 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 EXOC4Q96A65 974 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 KLHL15Q96M94 604 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 SH3GL2Q99962 352 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 UBAC1Q9BSL1 405 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 VIPAS39Q9H9C1 493 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 BRF2Q9HAW0 419 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 MAGEE1Q9HCI5 957 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 CISD1Q9NZ45 108 aaKnown RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 RWDD2AQ9UIY3 292 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 SARDHQ9UL12 918 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 CRYL1Q9Y2S2 319 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 PCDHGB1Q9Y5G3 927 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 SLIT2O94813 1529 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 MYH2Q9UKX2 1941 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 COL1A1P02452 1464 aaPredicted RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 NRAPQ86VF7 1730 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 ATP8B3O60423 1300 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 A0A0G2JLW4 131 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 ESYT2A0FGR8 921 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 CPED1A4D0V7 1026 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 LRRC53A6NM62 1247 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 POLR2DO15514 142 aaKnown RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 KIF5CO60282 957 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 RPS6KA5O75582 802 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 CAMTA2O94983 1202 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 ZNF12P17014 697 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 ITGAXP20702 1163 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 MARCKSP29966 332 aaPredicted RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 CASQ1P31415 396 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 HNRNPH3P31942 346 aaKnown RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 HNRNPH1P31943 449 aaKnown RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 STX2P32856 288 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 TDO2P48775 406 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 CBX1P83916 185 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 BNC1Q01954 994 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 TRAF3Q13114 568 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 PNOCQ13519 176 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 TDGQ13569 410 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 MEA1Q16626 185 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 SPSB3Q6PJ21 355 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 SYT10Q6XYQ8 523 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 CHST3Q7LGC8 479 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 C16orf82Q7Z2V1 217 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 ZC3HC1Q86WB0 502 aaKnown RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 NAXEQ8NCW5 288 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 CCDC148Q8NFR7 591 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 NUP58Q9BVL2 599 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 SLC26A6Q9BXS9 759 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 NUF2Q9BZD4 464 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 EDEM3Q9BZQ6 932 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 CCSER1Q9C0I3 900 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 ANKRD2Q9GZV1 360 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 UNC45AQ9H3U1 944 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 PLEKHA4Q9H4M7 779 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 UBN1Q9NPG3 1134 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 MED4Q9NPJ6 270 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 ZNHIT6Q9NWK9 470 aaKnown RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 ZNF446Q9NWS9 450 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 SLCO3A1Q9UIG8 710 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 NAP1L2Q9ULW6 460 aaPredicted RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 ARHGAP26Q9UNA1 814 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 LRP12Q9Y561 859 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 SCINQ9Y6U3 715 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 COL16A1Q07092 1604 aaPredicted RBP4.81□□□□□ -1.64
SSR3-209ENST00000498205 CCDC88AQ3V6T2 1871 aa4.81□□□□□ -1.64
SSR3-209ENST00000498205 DOT1LQ8TEK3 1739 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 MYH14Q7Z406 1995 aaKnown RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 SYNRGQ9UMZ2 1314 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 PSMD14O00487 310 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 CREB3O43889 395 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 SRCP12931 536 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 SCG2P13521 617 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 PLA2G2AP14555 144 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 PRLRP16471 622 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 RRM1P23921 792 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 GGT5P36269 586 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 NOVP48745 357 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 CAVIN4Q5BKX8 364 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 FAM69AQ5T7M9 428 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 ZNF658Q5TYW1 1059 aaPredicted RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 FAM69BQ5VUD6 431 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 C9orf57Q5W0N0 161 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 PLEKHA7Q6IQ23 1121 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 METTL2BQ6P1Q9 378 aaKnown RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 MMS22LQ6ZRQ5 1243 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 SLC46A3Q7Z3Q1 461 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 CCDC170Q8IYT3 715 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms