RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 HEBP1Q9NRV9 189 aa17.54■□□□□ 0.4
CHRNA4-206ENST00000498043 TXLNGQ9NUQ3 528 aa17.54■□□□□ 0.4
CHRNA4-206ENST00000498043 ADAMTS6Q9UKP5 1117 aa17.54■□□□□ 0.4
CHRNA4-206ENST00000498043 CAPN7Q9Y6W3 813 aa17.54■□□□□ 0.4
CHRNA4-206ENST00000498043 TRIOBPQ9H2D6 2365 aa17.54■□□□□ 0.4
CHRNA4-206ENST00000498043 OR2AG2A6NM03 316 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 K7ESM1 405 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 LZTS3O60299 673 aaPredicted RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 SYNCRIPO60506 623 aaKnown RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 SNUPNO95149 360 aaKnown RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 CAMK2GQ13555 558 aaPredicted RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 UBAP2LQ14157 1087 aaKnown RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 PON2Q15165 354 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 CST6Q15828 149 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 PIP5KL1Q5T9C9 394 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 BEND7Q8N7W2 519 aaPredicted RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 CXorf40AQ8TE69 158 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 OR52B2Q96RD2 323 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 TRMOQ9BU70 441 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 RSPH9Q9H1X1 276 aaPredicted RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 LATS2Q9NRM7 1088 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 PIAS3Q9Y6X2 628 aa17.53■□□□□ 0.4
CHRNA4-206ENST00000498043 E9PBE3 544 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 KLHL41O60662 606 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 CCDC22O60826 627 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 SKAP2O75563 359 aaPredicted RBP17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 SOD1P00441 154 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 EGFP01133 1207 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 SERPINA6P08185 405 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 T-ENOLP0DO92 83 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 PPP1R3AQ16821 1122 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 SPDYAQ5MJ70 313 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 KIAA1211LQ6NV74 962 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 CYP2U1Q7Z449 544 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 ESAMQ96AP7 390 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 ARL8BQ9NVJ2 186 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 NUDT4Q9NZJ9 180 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 FAM8A1Q9UBU6 413 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 VTI1BQ9UEU0 232 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 SERGEFQ9UGK8 458 aa17.52■□□□□ 0.4
CHRNA4-206ENST00000498043 CCDC189A1A4V9 331 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 SLCO1B7G3V0H7 640 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 PPP6CO00743 305 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 KLK8O60259 260 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 RNASEH1O60930 286 aaKnown RBP17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 RPS17P08708 135 aaKnown RBP17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 EPHA3P29320 983 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 HSPA14Q0VDF9 509 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 CCDC85BQ15834 202 aaPredicted RBP17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 TMEM52BQ4KMG9 183 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 LDLRAP1Q5SW96 308 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 CLEC6AQ6EIG7 209 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 RAET1GQ6H3X3 334 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 TRIM74Q86UV6 250 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 PHYKPLQ8IUZ5 450 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 TRPC4APQ8TEL6 797 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 GAS2L1Q99501 681 aaPredicted RBP17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 FAM126AQ9BYI3 521 aaPredicted RBP17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 TCF7L2Q9NQB0 619 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 LIMD1Q9UGP4 676 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 EIF2B4Q9UI10 523 aaKnown RBP17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 ASB1Q9Y576 335 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 FADS3Q9Y5Q0 445 aa17.52■□□□□ 0.39
CHRNA4-206ENST00000498043 STX16-NPEPL1H3BU86 382 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 STX16O14662 325 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 SGTAO43765 313 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 DNAJC8O75937 253 aaPredicted RBP17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 AOAHP28039 575 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 GALNT1Q10472 559 aaPredicted RBP17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 AGBL4Q5VU57 503 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 KIF2BQ8N4N8 673 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 RAB7BQ96AH8 199 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 KCNK12Q9HB15 430 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 MID1IP1Q9NPA3 183 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 SEMA4BQ9NPR2 832 aaPredicted RBP17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 A0A1W2PP55 124 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 NPC1O15118 1278 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 GUCA1CO95843 209 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 SH3BP2P78314 561 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 PHKG1Q16816 387 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 TREML1Q86YW5 311 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 RAVER1Q8IY67 606 aaKnown RBP17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 RASGEF1AQ8N9B8 481 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 SKA2Q8WVK7 121 aaPredicted RBP17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 KLHL29Q96CT2 875 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 SAR1AQ9NR31 198 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 PCTPQ9UKL6 214 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 COLQQ9Y215 455 aaPredicted RBP17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 CDYLQ9Y232 598 aa17.51■□□□□ 0.39
CHRNA4-206ENST00000498043 SOX1O00570 391 aaPredicted RBP17.5■□□□□ 0.39
CHRNA4-206ENST00000498043 RAD51BO15315 384 aa17.5■□□□□ 0.39
CHRNA4-206ENST00000498043 FFAR2O15552 330 aa17.5■□□□□ 0.39
CHRNA4-206ENST00000498043 CDK14O94921 469 aa17.5■□□□□ 0.39
CHRNA4-206ENST00000498043 AP2A2O94973 939 aa17.5■□□□□ 0.39
CHRNA4-206ENST00000498043 ADH1BP00325 375 aa17.5■□□□□ 0.39
CHRNA4-206ENST00000498043 S100BP04271 92 aaPredicted RBP17.5■□□□□ 0.39
CHRNA4-206ENST00000498043 CBSLP0DN79 551 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms