RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 RGSL1A5PLK6 1076 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 GPR89AB7ZAQ6 455 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 GOLGA6L19H0YKK7 550 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 PRPSAP2O60256 369 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 SLC25A14O95258 325 aaPredicted RBP16.11■□□□□ 0.17
VIM-208ENST00000497849 GPR89BP0CG08 455 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 FECHP22830 423 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 RORAP35398 523 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 PER3P56645 1201 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 GSDMDP57764 484 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 HSD11B2P80365 405 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 DSC2Q02487 901 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 ITKQ08881 620 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 KYNUQ16719 465 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 AGAP9Q5VTM2 703 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 ALG1LQ6GMV1 187 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 FAM198BQ6UWH4 519 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 CUZD1Q86UP6 607 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.11■□□□□ 0.17
VIM-208ENST00000497849 LPCAT1Q8NF37 534 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 SGSM3Q96HU1 749 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 AGPAT1Q99943 283 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 TRIM7Q9C029 511 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 POLR1EQ9GZS1 481 aaKnown RBP16.11■□□□□ 0.17
VIM-208ENST00000497849 PKD2L2Q9NZM6 624 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 TRIM10Q9UDY6 481 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 OSGIN2Q9Y236 505 aa16.11■□□□□ 0.17
VIM-208ENST00000497849 E2F3O00716 465 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 KMOO15229 486 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 IDSP22304 550 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 ITGA3P26006 1051 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 GLRBP48167 497 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 ARL4DP49703 201 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 ANKRD20A8PQ5CZ79 823 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 LYPLAL1Q5VWZ2 237 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 ACAD10Q6JQN1 1059 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 Q6ZS92 163 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 POLNQ7Z5Q5 900 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 C11orf96Q7Z7L8 435 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 LRRTM4Q86VH4 590 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 KCNMB4Q86W47 210 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 GPR150Q8NGU9 434 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 ARRDC2Q8TBH0 407 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 NAP1L5Q96NT1 182 aaPredicted RBP16.1■□□□□ 0.17
VIM-208ENST00000497849 ZNF552Q9H707 407 aaPredicted RBP16.1■□□□□ 0.17
VIM-208ENST00000497849 ZBTB20Q9HC78 741 aaPredicted RBP16.1■□□□□ 0.17
VIM-208ENST00000497849 LATS2Q9NRM7 1088 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 TAS2R14Q9NYV8 317 aa16.1■□□□□ 0.17
VIM-208ENST00000497849 FER1L5A0AVI2 2057 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 HEATR9A2RTY3 570 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 TMEM191CA6NGB0 347 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 TLCD2A6NGC4 264 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 H3BRJ5 948 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 ATMINO43313 823 aaPredicted RBP16.09■□□□□ 0.17
VIM-208ENST00000497849 MTX2O75431 263 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 RNF8O76064 485 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 RPL26P61254 145 aaKnown RBP16.09■□□□□ 0.17
VIM-208ENST00000497849 FANCCQ00597 558 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 ABRQ12979 859 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 LLGL1Q15334 1064 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 SYCP1Q15431 976 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 DPYSL2Q16555 572 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 QPCTQ16769 361 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 KHDC1Q4VXA5 237 aaKnown RBP16.09■□□□□ 0.17
VIM-208ENST00000497849 ZNF569Q5MCW4 686 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
VIM-208ENST00000497849 ALS2CLQ60I27 953 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 PLEKHA7Q6IQ23 1121 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 GPR26Q8NDV2 337 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 OR8K5Q8NH50 307 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 LURAP1Q96LR2 239 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 CSPG4P5Q96PW8 444 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 SPATA16Q9BXB7 569 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 RUBCNLQ9H714 662 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 PCDH9Q9HC56 1237 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 AGPAT4Q9NRZ5 378 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 PCMTD2Q9NV79 361 aa16.09■□□□□ 0.17
VIM-208ENST00000497849 RPL26L1Q9UNX3 145 aaKnown RBP16.09■□□□□ 0.17
VIM-208ENST00000497849 UBA6A0AVT1 1052 aaPredicted RBP16.08■□□□□ 0.16
VIM-208ENST00000497849 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 IL1R2P27930 398 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 TPM4P67936 248 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 NIPAL4Q0D2K0 466 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 MYBPC3Q14896 1274 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 MYO7BQ6PIF6 2116 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 SPOCD1Q6ZMY3 1216 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 TTC30BQ8N4P2 665 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 ANKRD20A12PQ8NF67 263 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 CPT1BQ92523 772 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 GLYATL1Q969I3 302 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 CD180Q99467 661 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 PARVAQ9NVD7 372 aa16.08■□□□□ 0.16
VIM-208ENST00000497849 CNTRLQ7Z7A1 2325 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 OR5K3A6NET4 321 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 ANKRD66B4E2M5 251 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 DDX3YO15523 660 aaKnown RBP16.07■□□□□ 0.16
VIM-208ENST00000497849 LCA5LO95447 670 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 ZBTB11O95625 1053 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms