RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 LNP1A1A4G5 178 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 H0YIN7 160 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 TMEM189-UBE2V1I3L0A0 370 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 J3QR06 171 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 BMPR1BO00238 502 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 KCNN4O15554 427 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 DKC1O60832 514 aaKnown RBP eCLIP3.21□□□□□ -1.9
PHC3-216ENST00000497171 AFPP02771 609 aaKnown RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 IGHV4-30-4P0DP06 118 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 DNASE1P24855 282 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 NMBRP28336 390 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 CORO1AP31146 461 aaKnown RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 APOBEC1P41238 236 aaKnown RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 MMP14P50281 582 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 ARSEP51690 589 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 CLDN20P56880 219 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 TRAF3Q13114 568 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 UBE2V1Q13404 147 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 OASLQ15646 514 aaKnown RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 DECR1Q16698 335 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 MYLK3Q32MK0 819 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 ZDHHC20Q5W0Z9 365 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 ADALQ6DHV7 355 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 C8orf82Q6P1X6 216 aaPredicted RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 INTS8Q75QN2 995 aaKnown RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 HAUS6Q7Z4H7 955 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 LDB1Q86U70 411 aaPredicted RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 MAP7D3Q8IWC1 876 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 DCUN1D3Q8IWE4 304 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 MINDY1Q8N5J2 469 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 SLC44A1Q8WWI5 657 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 LPGAT1Q92604 370 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 TAAR8Q969N4 342 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 SCMH1Q96GD3 660 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 QRFPRQ96P65 431 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 FIZ1Q96SL8 496 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 CCDC177Q9NQR7 707 aaPredicted RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 WSB2Q9NYS7 404 aaPredicted RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 BCCIPQ9P287 314 aaKnown RBP eCLIP3.21□□□□□ -1.9
PHC3-216ENST00000497171 DNAJB4Q9UDY4 337 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 CFDP1Q9UEE9 299 aaPredicted RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 PADI3Q9ULW8 664 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 AMDHD2Q9Y303 409 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 ZNF711Q9Y462 761 aa3.21□□□□□ -1.9
PHC3-216ENST00000497171 COL2A1P02458 1487 aaPredicted RBP3.21□□□□□ -1.9
PHC3-216ENST00000497171 PTPRCP08575 1304 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 A0A0G2JPF8 293 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GOLGA6L9A6NEM1 432 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 HNRNPCL3B7ZW38 293 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 MID1O15344 667 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ZNF217O75362 1048 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GAGE7O76087 117 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GGPS1O95749 300 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 TBX6O95947 436 aaPredicted RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 TPOP07202 933 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GAGE12FP0CL80 117 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GAGE12GP0CL81 117 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GAGE12IP0CL82 117 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 HNRNPCL4P0DMR1 293 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 DAOP14920 347 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 HRH2P25021 359 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 NOVP48745 357 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ISL1P61371 349 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 SNRPEP62304 92 aaKnown RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 SPOCK1Q08629 439 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GAGE1Q13065 139 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 GAGE4Q13068 117 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 SNAPC1Q16533 368 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 C9orf152Q5JTZ5 239 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 C1orf141Q5JVX7 400 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ERMARDQ5T6L9 678 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 C6orf163Q5TEZ5 329 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 IRAK1BP1Q5VVH5 260 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 KRT79Q5XKE5 535 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ALS2CLQ60I27 953 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 DHRS7BQ6IAN0 325 aaPredicted RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 RPUSD3Q6P087 351 aaKnown RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 PAPD4Q6PIY7 484 aaKnown RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 MEX3BQ6ZN04 569 aaKnown RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 KRT74Q7RTS7 529 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ADGRA1Q86SQ6 560 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 NRROSQ86YC3 692 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 CEP97Q8IW35 865 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 CHERPQ8IWX8 916 aaKnown RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 MCEMP1Q8IX19 187 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ODF3L1Q8IXM7 274 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 PM20D2Q8IYS1 436 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 RNF113BQ8IZP6 322 aaKnown RBP3.2□□□□□ -1.9
PHC3-216ENST00000497171 CLIP4Q8N3C7 705 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 SLC5A8Q8N695 610 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ZNF485Q8NCK3 441 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 TBC1D16Q8TBP0 767 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 SLC38A5Q8WUX1 472 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ZFAND2BQ8WV99 257 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 TEKT4Q8WW24 435 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 PIGTQ969N2 578 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ZNF622Q969S3 477 aaKnown RBP eCLIP3.2□□□□□ -1.9
PHC3-216ENST00000497171 TMEM19Q96HH6 336 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 ADGRG7Q96K78 797 aa3.2□□□□□ -1.9
PHC3-216ENST00000497171 DGAT2Q96PD7 388 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms