RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 KCTD3Q9Y597 815 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 SETXQ7Z333 2677 aaKnown RBP14.02□□□□□ -0.17
VTI1A-209ENST00000496445 OR2AG2A6NM03 316 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 RAD1O60671 282 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 PPFIA2O75334 1257 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 ANXA9O76027 345 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 IPO7O95373 1038 aaKnown RBP14.01□□□□□ -0.17
VTI1A-209ENST00000496445 PRAMEF1O95521 474 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 ITGB2P05107 769 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 LIFP15018 202 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 LEPRP48357 1165 aaKnown RBP14.01□□□□□ -0.17
VTI1A-209ENST00000496445 ITGA9Q13797 1035 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 TMEM220Q6QAJ8 160 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 PLXDC1Q8IUK5 500 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 KLHDC8BQ8IXV7 354 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 CACNA2D3Q8IZS8 1091 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 BEND7Q8N7W2 519 aaPredicted RBP14.01□□□□□ -0.17
VTI1A-209ENST00000496445 OR4K2Q8NGD2 314 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 CCDC110Q8TBZ0 833 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 C9orf72Q96LT7 481 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 SPATA13Q96N96 652 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 SLC12A9Q9BXP2 914 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 ZCCHC2Q9C0B9 1178 aaKnown RBP14.01□□□□□ -0.17
VTI1A-209ENST00000496445 ASH1LQ9NR48 2969 aaKnown RBP14.01□□□□□ -0.17
VTI1A-209ENST00000496445 FBXO8Q9NRD0 319 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 FKBPLQ9UIM3 349 aa14.01□□□□□ -0.17
VTI1A-209ENST00000496445 PACSIN2Q9UNF0 486 aaPredicted RBP14.01□□□□□ -0.17
VTI1A-209ENST00000496445 STX7O15400 261 aaKnown RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 CAPN5O15484 640 aaPredicted RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 POP7O75817 140 aaKnown RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 DLGAP3O95886 979 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 VCLP18206 1134 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 LPOP22079 712 aaPredicted RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 ZNF140P52738 457 aaPredicted RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 XIAPP98170 497 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 NFE2L1Q14494 772 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 TAF1AQ15573 450 aaPredicted RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 DENND5AQ6IQ26 1287 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 DARS2Q6PI48 645 aaKnown RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 CEACAM20Q6UY09 585 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 MICALCLQ6ZW33 695 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 TIPARPQ7Z3E1 657 aaKnown RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 ZNF605Q86T29 641 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 AMZ2Q86W34 360 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 IL22RA1Q8N6P7 574 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 OR13C4Q8NGS5 318 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 CXorf40BQ96DE9 158 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 TTC25Q96NG3 672 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 TGM7Q96PF1 710 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 BAG1Q99933 345 aaPredicted RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 DESI2Q9BSY9 194 aa14□□□□□ -0.17
VTI1A-209ENST00000496445 ZNF768Q9H5H4 540 aaKnown RBP14□□□□□ -0.17
VTI1A-209ENST00000496445 DDX3YO15523 660 aaKnown RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 SGTAO43765 313 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 KIF1CO43896 1103 aaKnown RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 KCNJ13O60928 360 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 SRP72O76094 671 aaKnown RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 TJP3O95049 919 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 PBLDP30039 288 aaPredicted RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 AKT1P31749 480 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 PPP1CAP62136 330 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 SH3BP2P78314 561 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 KLF1Q13351 362 aaPredicted RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 SPARCL1Q14515 664 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 RPE65Q16518 533 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 TBR1Q16650 682 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 DET1Q7L5Y6 550 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 PRSS42Q7Z5A4 293 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 KIAA1328Q86T90 577 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 RBM12BQ8IXT5 1001 aaKnown RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 ZSCAN1Q8NBB4 408 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 ZNF398Q8TD17 642 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 TBL1YQ9BQ87 522 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 AMFRQ9UKV5 643 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 PSMD13Q9UNM6 376 aa13.99□□□□□ -0.17
VTI1A-209ENST00000496445 AAR2Q9Y312 384 aaKnown RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 TMEM184BQ9Y519 407 aaPredicted RBP13.99□□□□□ -0.17
VTI1A-209ENST00000496445 UBR5O95071 2799 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-209ENST00000496445 LOC101059948A0A1B0GTJ6 334 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 C2orf81A6NN90 581 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 AGAP14A8MT82 685 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 B8ZZF3 427 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 TOX3O15405 576 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-209ENST00000496445 STK17BO94768 372 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 STK10O94804 968 aaKnown RBP13.98□□□□□ -0.17
VTI1A-209ENST00000496445 FTCDO95954 541 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 FAM87AP0C7U9 286 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 AMD1P17707 334 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 MSH3P20585 1137 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 HALP42357 657 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 SEPHS1P49903 392 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 GDF10P55107 478 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 PRPSAP1Q14558 356 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 FNBP1LQ5T0N5 605 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 METRNLQ641Q3 311 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 KCTD11Q693B1 232 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 DUS1LQ6P1R4 473 aaKnown RBP13.98□□□□□ -0.17
VTI1A-209ENST00000496445 FAM92BQ6ZTR7 304 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 PEX26Q7Z412 305 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 NLGN4XQ8N0W4 816 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms