RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TAS2R14Q9NYV8 317 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 LARSQ9P2J5 1176 aaKnown RBP3.65□□□□□ -1.83
CLK1-214ENST00000496205 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
CLK1-214ENST00000496205 IGLV5-52A0A0A0MRZ9 124 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 A0A1W2PPM1 405 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 TRBC2A0A5B9 178 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 OR6C75A6NL08 312 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 TMEM189-UBE2V1I3L0A0 370 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 J3QR06 171 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 SPINT2O43291 252 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 LDB3O75112 727 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 AFPP02771 609 aaKnown RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 PTMAP06454 111 aaKnown RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 HOXC6P09630 235 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 ZNF12P17014 697 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 CORO1AP31146 461 aaKnown RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 CAPZA2P47755 286 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 SEC61BP60468 96 aaKnown RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 FOXM1Q08050 763 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 TROAPQ12815 778 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 UBE2V1Q13404 147 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 ALCAMQ13740 583 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 MVPQ14764 893 aaKnown RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 PLCB4Q15147 1175 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 CTF1Q16619 201 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 RAB6CQ53S08 254 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 KCNT1Q5JUK3 1230 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 KRBOX4Q5JUW0 171 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 DCST1Q5T197 706 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 BRAT1Q6PJG6 821 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 RAD9BQ6WBX8 426 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 GET4Q7L5D6 327 aaPredicted RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 FBXO39Q8N4B4 442 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 CHCHD4Q8N4Q1 142 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 TC2NQ8N9U0 490 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 POMGNT2Q8NAT1 580 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 XXYLT1Q8NBI6 393 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 CFAP61Q8NHU2 1237 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 ATP6V1E2Q96A05 226 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 VMP1Q96GC9 406 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 ZNF830Q96NB3 372 aaPredicted RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 DACH2Q96NX9 599 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 NUDCD1Q96RS6 583 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 SLC22A12Q96S37 553 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 SLC25A33Q9BSK2 321 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 SYT17Q9BSW7 474 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 RTN4RQ9BZR6 473 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 SPATC1LQ9H0A9 340 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 RAB6CQ9H0N0 254 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 MRGBPQ9NV56 204 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 TRMT1Q9NXH9 659 aaKnown RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 PSD3Q9NYI0 1048 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 HAO2Q9NYQ3 351 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 KLHL9Q9P2J3 617 aa3.64□□□□□ -1.83
CLK1-214ENST00000496205 ZHX1Q9UKY1 873 aaPredicted RBP3.64□□□□□ -1.83
CLK1-214ENST00000496205 PLK4O00444 970 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 KDM4BO94953 1096 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 CLDN14O95500 239 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 PPP1R3DO95685 299 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 GGPS1O95749 300 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 GH2P01242 217 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 TPOP07202 933 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 IGHV4-30-4P0DP06 118 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 FASLGP48023 281 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 PCYT1AP49585 367 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 CCR3P51677 355 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 PLIN5Q00G26 463 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 MAD2L1Q13257 205 aaPredicted RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 PRPF4BQ13523 1007 aaKnown RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 CAMK2DQ13557 499 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 OASLQ15646 514 aaKnown RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 LETM2Q2VYF4 491 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 TDRD12Q587J7 1177 aaKnown RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 HECTD3Q5T447 861 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 C6orf163Q5TEZ5 329 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 ALS2CLQ60I27 953 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 RGMBQ6NW40 437 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 C8orf82Q6P1X6 216 aaPredicted RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 SUSD1Q6UWL2 747 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 RBPMS2Q6ZRY4 209 aaKnown RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 Q75L30 129 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 ZNF534Q76KX8 674 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 CAMKMTQ7Z624 323 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 CREBRFQ8IUR6 639 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 CLIP4Q8N3C7 705 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 OR14A16Q8NHC5 309 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 TBC1D16Q8TBP0 767 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 WDR20Q8TBZ3 569 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 TEKT4Q8WW24 435 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 SECISBP2LQ93073 1101 aaKnown RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 SCMH1Q96GD3 660 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 SEZ6LQ9BYH1 1024 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 RAD21L1Q9H4I0 556 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 RABEP2Q9H5N1 569 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 DENND2DQ9H6A0 471 aaPredicted RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 HIF1ANQ9NWT6 349 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 UBA2Q9UBT2 640 aaPredicted RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 PPIEQ9UNP9 301 aaKnown RBP3.63□□□□□ -1.83
CLK1-214ENST00000496205 KLHL20Q9Y2M5 609 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 PAM16Q9Y3D7 125 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms