RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PSMB4P28070 264 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 DMPKQ09013 629 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 LONRF2Q1L5Z9 754 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 LINC00303Q3SY05 128 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 AADACL2Q6P093 401 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 GAS2L3Q86XJ1 694 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 OR4K2Q8NGD2 314 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 CCDC110Q8TBZ0 833 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 ALG3Q92685 438 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 RTP4Q96DX8 246 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 ZDHHC12Q96GR4 267 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 SPATA13Q96N96 652 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 TGM7Q96PF1 710 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 CTRCQ99895 268 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 FAM118BQ9BPY3 351 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 APOL2Q9BQE5 337 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 GORASP1Q9BQQ3 440 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 SEMA4CQ9C0C4 833 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 TRIT1Q9H3H1 467 aaKnown RBP12.51□□□□□ -0.41
PTPRF-214ENST00000496043 ASB8Q9H765 288 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 IMPACTQ9P2X3 320 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 PILRAQ9UKJ1 303 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 WDR37Q9Y2I8 494 aa12.51□□□□□ -0.41
PTPRF-214ENST00000496043 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 OR2AG2A6NM03 316 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 B8ZZF3 427 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 GAPDHSO14556 408 aaPredicted RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 SRP72O76094 671 aaKnown RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 SFTPCP11686 197 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 WT1P19544 449 aaPredicted RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 AKT1P31749 480 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 CA5AP35218 305 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 CTSCP53634 463 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 GFERP55789 205 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 GPR18Q14330 331 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 RPE65Q16518 533 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 TBR1Q16650 682 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 PARP6Q2NL67 630 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 METRNLQ641Q3 311 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 NLGN4XQ8N0W4 816 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 BEND7Q8N7W2 519 aaPredicted RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 EXD3Q8N9H8 876 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 NLGN4YQ8NFZ3 816 aaPredicted RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 EXTL1Q92935 676 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 DCUN1D1Q96GG9 259 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 C19orf43Q9BQ61 176 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 TBL1YQ9BQ87 522 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 EFHD1Q9BUP0 239 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 SLC12A9Q9BXP2 914 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 ARNT2Q9HBZ2 717 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 SMOXQ9NWM0 555 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 EPHA6Q9UF33 1036 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 FEZ2Q9UHY8 353 aaPredicted RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 ACSL5Q9ULC5 683 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 KCTD3Q9Y597 815 aa12.5□□□□□ -0.41
PTPRF-214ENST00000496043 MN1Q10571 1320 aaPredicted RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 ZFC3H1O60293 1989 aaKnown RBP12.5□□□□□ -0.41
PTPRF-214ENST00000496043 MGAT4DA6NG13 374 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 PSMD3O43242 534 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 RASSF9O75901 435 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 PRAMEF1O95521 474 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 RALBP11234 206 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 HADHAP40939 763 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 SEPHS1P49903 392 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 CYP4F2P78329 520 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 XIAPP98170 497 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 FOXM1Q08050 763 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 MSLNQ13421 630 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-214ENST00000496043 OLIG2Q13516 323 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 NFE2L1Q14494 772 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 SPARCL1Q14515 664 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 FNBP1LQ5T0N5 605 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 CACHD1Q5VU97 1274 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 ARHGEF18Q6ZSZ5 1173 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 DET1Q7L5Y6 550 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 ZFPM2Q8WW38 1151 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 KIAA1143Q96AT1 154 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-214ENST00000496043 ULK4Q96C45 1275 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 RAB33BQ9H082 229 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 APMAPQ9HDC9 416 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 FKBPLQ9UIM3 349 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 CRLS1Q9UJA2 301 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 TMEM184BQ9Y519 407 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-214ENST00000496043 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
PTPRF-214ENST00000496043 DDX3YO15523 660 aaKnown RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 GPR39O43194 453 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 STK17BO94768 372 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 PLA2G2AP14555 144 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 LIFP15018 202 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 CDC25BP30305 580 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 LEPRP48357 1165 aaKnown RBP12.48□□□□□ -0.41
PTPRF-214ENST00000496043 TMPRSS15P98073 1019 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 ABHD18Q0P651 414 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 IL11RAQ14626 422 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 DENND5AQ6IQ26 1287 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 IRGCQ6NXR0 463 aa12.48□□□□□ -0.41
PTPRF-214ENST00000496043 FAM83HQ6ZRV2 1179 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms