RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 LRIG3Q6UXM1 1119 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 TAOK1Q7L7X3 1001 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 FAM45AQ8TCE6 357 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 LKAAEAR1Q8TD35 194 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 KCNJ9Q92806 393 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 ELMO2Q96JJ3 720 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 LINC00615Q96LM1 132 aaPredicted RBP19.17■□□□□ 0.66
ATG3-208ENST00000495756 PANX3Q96QZ0 392 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 CCM2Q9BSQ5 444 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 TSSK1BQ9BXA7 367 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 ERVMER34-1Q9H9K5 563 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 TM7SF3Q9NS93 570 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 FAM86C1Q9NVL1 165 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 DNAJC28Q9NX36 388 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 CTNNAL1Q9UBT7 734 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 SLC6A14Q9UN76 642 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 VWA7Q9Y334 891 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 GPSM3Q9Y4H4 160 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 SNX11Q9Y5W9 270 aa19.17■□□□□ 0.66
ATG3-208ENST00000495756 DNMT3AQ9Y6K1 912 aaPredicted RBP19.17■□□□□ 0.66
ATG3-208ENST00000495756 POP7O75817 140 aaKnown RBP19.16■□□□□ 0.66
ATG3-208ENST00000495756 TNFP01375 233 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 CSF2P04141 144 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 NME1P15531 152 aaKnown RBP19.16■□□□□ 0.66
ATG3-208ENST00000495756 ITGB6P18564 788 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 CHRM3P20309 590 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 NBL1P41271 181 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 BLKP51451 505 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 CDKN2DP55273 166 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 TIAL1Q01085 375 aaKnown RBP eCLIP19.16■□□□□ 0.66
ATG3-208ENST00000495756 BMPR2Q13873 1038 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 TRIM61Q5EBN2 209 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 LGSNQ5TDP6 509 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 CHST15Q7LFX5 561 aaPredicted RBP19.16■□□□□ 0.66
ATG3-208ENST00000495756 PHACTR4Q8IZ21 702 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 DCLK2Q8N568 766 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 OXR1Q8N573 874 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 FAM136AQ96C01 138 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 OR2M4Q96R27 311 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 EURLQ9NYK6 297 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 SLC23A2Q9UGH3 650 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 SLC39A10Q9ULF5 831 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 TLDC2A0PJX2 215 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 E5RI56 91 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 SCAMP1O15126 338 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 KRT37O76014 449 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 RETP07949 1114 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 GSTM1P09488 218 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 JUNDP17535 347 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 SAT1P21673 171 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 FDXRP22570 491 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 TAS2R39P59534 338 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 POU4F1Q01851 419 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 GSTM4Q03013 218 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 GRIK2Q13002 908 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 PLA2G4EQ3MJ16 856 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 AMZ2Q86W34 360 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 OLFM1Q99784 485 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 TIMM29Q9BSF4 260 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 SLC13A1Q9BZW2 595 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 TCEAL2Q9H3H9 227 aaPredicted RBP19.16■□□□□ 0.66
ATG3-208ENST00000495756 CAAP1Q9H8G2 361 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 SPATS2LQ9NUQ6 558 aaKnown RBP19.16■□□□□ 0.66
ATG3-208ENST00000495756 TRNAU1APQ9NX07 287 aaKnown RBP19.16■□□□□ 0.66
ATG3-208ENST00000495756 TAS2R13Q9NYV9 303 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 GALPQ9UBC7 116 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 GULP1Q9UBP9 304 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 TBK1Q9UHD2 729 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 RAPGEFL1Q9UHV5 662 aa19.16■□□□□ 0.66
ATG3-208ENST00000495756 IQANK1A0A1B0GTG1 560 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 MGAT4DA6NG13 374 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 DYNC1I1O14576 645 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 VPS26AO75436 327 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 SNRPAP09012 282 aaKnown RBP19.15■□□□□ 0.66
ATG3-208ENST00000495756 ACP5P13686 325 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 CD9P21926 228 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 PBLDP30039 288 aaPredicted RBP19.15■□□□□ 0.66
ATG3-208ENST00000495756 CCR7P32248 378 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 CLCN7P51798 805 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 ARHGAP8P85298 464 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 LRP8Q14114 963 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 USP10Q14694 798 aaKnown RBP19.15■□□□□ 0.66
ATG3-208ENST00000495756 CCDC6Q16204 474 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 INSCQ1MX18 579 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 ZNF658BQ4V348 819 aaPredicted RBP19.15■□□□□ 0.66
ATG3-208ENST00000495756 PLA2G2CQ5R387 149 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 PRAMEF14Q5SWL7 426 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 CEP85LQ5SZL2 805 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 CNPY4Q8N129 248 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 RIBC1Q8N443 379 aaPredicted RBP19.15■□□□□ 0.66
ATG3-208ENST00000495756 OR2L2Q8NH16 312 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 ELMO1Q92556 727 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 GPR21Q99679 349 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 TMEM168Q9H0V1 697 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 VIPAS39Q9H9C1 493 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 CAB39LQ9H9S4 337 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 SARS2Q9NP81 518 aaKnown RBP19.15■□□□□ 0.66
ATG3-208ENST00000495756 FSCN3Q9NQT6 498 aa19.15■□□□□ 0.66
ATG3-208ENST00000495756 APOBEC3BQ9UH17 382 aaKnown RBP19.15■□□□□ 0.66
ATG3-208ENST00000495756 PLEKHM1Q9Y4G2 1056 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms