RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CERS6Q6ZMG9 384 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 ARL14Q8N4G2 192 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 LILRA3Q8N6C8 439 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 LRRN4CLQ8ND94 238 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 ZNF514Q96K75 400 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 TTC1Q99614 292 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 C20orf96Q9NUD7 363 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 RABGEF1Q9UJ41 708 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 APOBEC2Q9Y235 224 aaKnown RBP19.1■□□□□ 0.65
HDAC4-212ENST00000495497 TEX264Q9Y6I9 313 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 RNF215Q9Y6U7 377 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 FAM169AQ9Y6X4 670 aa19.1■□□□□ 0.65
HDAC4-212ENST00000495497 MGAT4DA6NG13 374 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 PDZK1P1A8MUH7 402 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 ESPNB1AK53 854 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 NDC80O14777 642 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 IDSP22304 550 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 PMLP29590 882 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 DEKP35659 375 aaKnown RBP19.09■□□□□ 0.65
HDAC4-212ENST00000495497 LONRF1Q17RB8 773 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 AARS2Q5JTZ9 985 aaKnown RBP19.09■□□□□ 0.65
HDAC4-212ENST00000495497 DNTTIP2Q5QJE6 756 aaKnown RBP19.09■□□□□ 0.65
HDAC4-212ENST00000495497 DHRS13Q6UX07 377 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 PACS1Q6VY07 963 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 NAPRTQ6XQN6 538 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 C17orf82Q86X59 251 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-212ENST00000495497 CFAP206Q8IYR0 622 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.09■□□□□ 0.65
HDAC4-212ENST00000495497 FBXO36Q8NEA4 188 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 OR2L2Q8NH16 312 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 FBXO25Q8TCJ0 367 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 CCDC74AQ96AQ1 378 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 LINC00615Q96LM1 132 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-212ENST00000495497 EPB41L5Q9HCM4 733 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 NCKIPSDQ9NZQ3 722 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 PSMD13Q9UNM6 376 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 WDR37Q9Y2I8 494 aa19.09■□□□□ 0.65
HDAC4-212ENST00000495497 SPEGQ15772 3267 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 BHMG1C9JSJ3 638 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-212ENST00000495497 E7ESA3 106 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 NDUFS3O75489 264 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 DKK1O94907 266 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 AP2A2O94973 939 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 TOP3BO95985 862 aaKnown RBP19.08■□□□□ 0.64
HDAC4-212ENST00000495497 F3P13726 295 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 BRAFP15056 766 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 VCLP18206 1134 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 ITGB6P18564 788 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 TTPAP49638 278 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 DMPKQ09013 629 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 THOC5Q13769 683 aaKnown RBP19.08■□□□□ 0.64
HDAC4-212ENST00000495497 ZNF789Q5FWF6 425 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 MRNIPQ6NTE8 343 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 IYDQ6PHW0 289 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 UNC5AQ6ZN44 842 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 SDCCAG8Q86SQ7 713 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-212ENST00000495497 KCNMB4Q86W47 210 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 DENND6AQ8IWF6 608 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 GPR150Q8NGU9 434 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 SLC37A2Q8TED4 501 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 CCM2Q9BSQ5 444 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 SAYSD1Q9NPB0 183 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 IARS2Q9NSE4 1012 aaKnown RBP19.08■□□□□ 0.64
HDAC4-212ENST00000495497 EVA1BQ9NVM1 165 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 LRIT1Q9P2V4 623 aa19.08■□□□□ 0.64
HDAC4-212ENST00000495497 ZC3H7BQ9UGR2 993 aaKnown RBP19.08■□□□□ 0.64
HDAC4-212ENST00000495497 UBA6A0AVT1 1052 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-212ENST00000495497 IQCF5A8MTL0 148 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 PPM1DO15297 605 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 KCNJ13O60928 360 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 OR56A5P0C7T3 313 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 ERVK-10P10266 1014 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 PPARGP37231 505 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-212ENST00000495497 FOXC1Q12948 553 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 CTBP1Q13363 440 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 CLCA4Q14CN2 919 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 BRD3Q15059 726 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 HSP90AA5PQ58FG0 334 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 SPANXN3Q5MJ09 141 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 ZNF470Q6ECI4 717 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 CENPUQ71F23 418 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 CILP2Q8IUL8 1156 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 ZBED8Q8IZ13 594 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 SFRP1Q8N474 314 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 CHCHD4Q8N4Q1 142 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 Q8N9G6 341 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-212ENST00000495497 MAPK15Q8TD08 544 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 LKAAEAR1Q8TD35 194 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 SEC14L1Q92503 715 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 LRRC39Q96DD0 335 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 CCDC3Q9BQI4 270 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 NAT9Q9BTE0 207 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 P2RY12Q9H244 342 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 FBXO6Q9NRD1 293 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-212ENST00000495497 PCDHGA1Q9Y5H4 931 aa19.07■□□□□ 0.64
HDAC4-212ENST00000495497 CNOT1A5YKK6 2376 aaKnown RBP19.07■□□□□ 0.64
HDAC4-212ENST00000495497 PRAMEF33A0A0G2JMD5 474 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 OR52A4PA6NMU1 304 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 TTC4O95801 387 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 GLB1P16278 677 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms