RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	SGTA	O43765	313 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	SNX2	O60749	519 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	POP7	O75817	140 aa	Known RBP	10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	VIP	P01282	170 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	GSTM1	P09488	218 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	HGF	P14210	728 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	ITIH1	P19827	911 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	CSTF2	P33240	577 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	CA5A	P35218	305 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	FDFT1	P37268	417 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	HAL	P42357	657 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	CCZ1B	P86790	482 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	CCZ1	P86791	482 aa	Predicted RBP	10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	RHD	Q02161	417 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	GSTM4	Q03013	218 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	VAC14	Q08AM6	782 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	OLIG2	Q13516	323 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	SEMA5A	Q13591	1074 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	LAMB3	Q13751	1172 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	RPS6KA1	Q15418	735 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	SIX1	Q15475	284 aa	Predicted RBP	10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZNF658B	Q4V348	819 aa	Predicted RBP	10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	C4orf22	Q6V702	233 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	NXPE1	Q8N323	547 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	OR13C4	Q8NGS5	318 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	STYX	Q8WUJ0	223 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	USP7	Q93009	1102 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	CRELD1	Q96HD1	420 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	ALS2CR12	Q96Q35	445 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	CCNL2	Q96S94	520 aa	Predicted RBP	10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZPBP	Q9BS86	351 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	SPRY4	Q9C004	299 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	OSGEPL1	Q9H4B0	414 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	ASB8	Q9H765	288 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	FBXO8	Q9NRD0	319 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	OGFR	Q9NZT2	677 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	TMEM9	Q9P0T7	183 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	FKBPL	Q9UIM3	349 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	ACSL5	Q9ULC5	683 aa		10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	DRG1	Q9Y295	367 aa	Known RBP	10.09	□□□□□ -0.79
NEPRO-222	ENST00000494891	ATRX	P46100	2492 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	PRAMEF33	A0A0G2JMD5	474 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	PDZK1P1	A8MUH7	402 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	ERVH48-1	M5A8F1	160 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	GPR39	O43194	453 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	NRDC	O43847	1150 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	PRAMEF10	O60809	474 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	UBXN7	O94888	489 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	RALB	P11234	206 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	CCL4	P13236	92 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	MSH3	P20585	1137 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	ITGAL	P20701	1170 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	CAPZB	P47756	277 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	PRLHR	P49683	370 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	ARSD	P51689	593 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	MC2R	Q01718	297 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	ACVR1	Q04771	509 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	CDH17	Q12864	832 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	PTPRCAP	Q14761	206 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	CLCA4	Q14CN2	919 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	ARMC3	Q5W041	872 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	FOXR1	Q6PIV2	292 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	TMEM220	Q6QAJ8	160 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	XKR5	Q6UX68	686 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	PRSS42	Q7Z5A4	293 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	RCBTB1	Q8NDN9	531 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	MAIP1	Q8WWC4	291 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	ATG4A	Q8WYN0	398 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	NCSTN	Q92542	709 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	SGSM3	Q96HU1	749 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	C9orf72	Q96LT7	481 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	RANBP9	Q96S59	729 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	COPS8	Q99627	209 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	APOL2	Q9BQE5	337 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	TBC1D10A	Q9BXI6	508 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	TLR10	Q9BXR5	811 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	SIDT1	Q9NXL6	827 aa	Known RBP	10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	FOXJ2	Q9P0K8	574 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	RALY	Q9UKM9	306 aa	Known RBP	10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	DNAJC16	Q9Y2G8	782 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	WDR37	Q9Y2I8	494 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	KCTD3	Q9Y597	815 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	CFAP46	Q8IYW2	2715 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	SDK2	Q58EX2	2172 aa		10.08	□□□□□ -0.8
NEPRO-222	ENST00000494891	OR2AG2	A6NM03	316 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	OR52A4P	A6NMU1	304 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	CFAP99	D6REC4	459 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	STMND1	H3BQB6	276 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	EFS	O43281	561 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	AP2A2	O94973	939 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	ATP1B2	P14415	290 aa	Predicted RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	ACRV1	P26436	265 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	RPL10	P27635	214 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	AKT1	P31749	480 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	CXADR	P78310	365 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	GPR18	Q14330	331 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	NFE2L1	Q14494	772 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	SPARCL1	Q14515	664 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	RPE65	Q16518	533 aa		10.07	□□□□□ -0.8
NEPRO-222	ENST00000494891	SKIDA1	Q1XH10	827 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms