RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TPP1O14773 563 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 CKMT2P17540 419 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 PGAM1P18669 254 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 PAMP19021 973 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 PSMA3P25788 255 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 PPM1FP49593 454 aaPredicted RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 ACADVLP49748 655 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 EIF3BP55884 814 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 FOXC1Q12948 553 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 BIRC2Q13490 618 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 LRP8Q14114 963 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 NR0B2Q15466 257 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 KIAA0930Q6ICG6 404 aaPredicted RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 TRMT10BQ6PF06 316 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 ZDHHC24Q6UX98 284 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 UNC5AQ6ZN44 842 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 EFL1Q7Z2Z2 1120 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 CFAP206Q8IYR0 622 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 MMGT1Q8N4V1 131 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 CEP112Q8N8E3 955 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
APTX-230ENST00000494649 IFI44Q8TCB0 444 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 LKAAEAR1Q8TD35 194 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 PLAC1Q9HBJ0 212 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 FBXO6Q9NRD1 293 aaPredicted RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 IARS2Q9NSE4 1012 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 RIMKLBQ9ULI2 386 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 PADI4Q9UM07 663 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 CELSR3Q9NYQ7 3312 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 FAM149AA5PLN7 773 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 ZNF500O60304 480 aaPredicted RBP10.93□□□□□ -0.66
APTX-230ENST00000494649 USP1O94782 785 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 TRIM16O95361 564 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 CKMT1AP12532 417 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 PREPP48147 710 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 MPP1Q00013 466 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 THOC5Q13769 683 aaKnown RBP10.93□□□□□ -0.66
APTX-230ENST00000494649 TUBB2AQ13885 445 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 BOP1Q14137 746 aaKnown RBP10.93□□□□□ -0.66
APTX-230ENST00000494649 LONRF1Q17RB8 773 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 NEPROQ6NW34 567 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 DUS1LQ6P1R4 473 aaKnown RBP10.93□□□□□ -0.66
APTX-230ENST00000494649 KCNMB4Q86W47 210 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 BBOF1Q8ND07 529 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 SLC37A2Q8TED4 501 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 JPH3Q8WXH2 748 aaPredicted RBP10.93□□□□□ -0.66
APTX-230ENST00000494649 PEX13Q92968 403 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 ART4Q93070 314 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 CCDC74AQ96AQ1 378 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 TUBB2BQ9BVA1 445 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 TEX264Q9Y6I9 313 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 RNF215Q9Y6U7 377 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 ZFC3H1O60293 1989 aaKnown RBP10.93□□□□□ -0.66
APTX-230ENST00000494649 ASXL3Q9C0F0 2248 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 IGLV3-16A0A075B6K0 115 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 MAGEB16A2A368 324 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 GPR89AB7ZAQ6 455 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 NDUFS3O75489 264 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 GPR89BP0CG08 455 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 BRAFP15056 766 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 ALDH4A1P30038 563 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 FMO4P31512 558 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 NSG1P42857 185 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 SLC1A2P43004 574 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 PRLHRP49683 370 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 CLCNKAP51800 687 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 HLTFQ14527 1009 aaKnown RBP eCLIP10.93□□□□□ -0.66
APTX-230ENST00000494649 CLCA4Q14CN2 919 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 C14orf28Q4W4Y0 310 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 CENPUQ71F23 418 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 ARL14Q8N4G2 192 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 CHCHD4Q8N4Q1 142 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 GPR156Q8NFN8 814 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 C9orf72Q96LT7 481 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 C19orf43Q9BQ61 176 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 SARS2Q9NP81 518 aaKnown RBP10.93□□□□□ -0.66
APTX-230ENST00000494649 LRIT1Q9P2V4 623 aa10.93□□□□□ -0.66
APTX-230ENST00000494649 PPM1DO15297 605 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 HYAL3O43820 417 aaPredicted RBP10.92□□□□□ -0.66
APTX-230ENST00000494649 F3P13726 295 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 PDHA2P29803 388 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 SSTR1P30872 391 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 AMZ1Q400G9 498 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 TEX35Q5T0J7 233 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 MRNIPQ6NTE8 343 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 LVRNQ6Q4G3 990 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 XKR5Q6UX68 686 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 CILP2Q8IUL8 1156 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 SDR16C5Q8N3Y7 309 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 FAM181AQ8N9Y4 354 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 ELMO1Q92556 727 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 ATXN7L3BQ96GX2 97 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 TTC1Q99614 292 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 CCDC3Q9BQI4 270 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 TIMM29Q9BSF4 260 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 IMP3Q9NV31 184 aaKnown RBP10.92□□□□□ -0.66
APTX-230ENST00000494649 FAM169AQ9Y6X4 670 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 RP1P56715 2156 aa10.92□□□□□ -0.66
APTX-230ENST00000494649 MED19A0JLT2 244 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms