RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 C19orf60Q96EN9 201 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 GDF15Q99988 308 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 TUBB1Q9H4B7 451 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 THG1LQ9NWX6 298 aaKnown RBP16.29■□□□□ 0.2
ATG4B-225ENST00000494465 EIF2B4Q9UI10 523 aaKnown RBP16.29■□□□□ 0.2
ATG4B-225ENST00000494465 ANTXRLA6NF34 631 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 CCR7P32248 378 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 NAA20P61599 178 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 MXRA7P84157 204 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 GRIN2CQ14957 1233 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 FNDC3BQ53EP0 1204 aaKnown RBP16.29■□□□□ 0.2
ATG4B-225ENST00000494465 MYO1HQ8N1T3 1032 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 TERB1Q8NA31 727 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 PDPRQ8NCN5 879 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 CLPTM1LQ96KA5 538 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 TMEM245Q9H330 911 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 KLHL42Q9P2K6 505 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 ITM2BQ9Y287 266 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 PTGDR2Q9Y5Y4 395 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 RGSL1A5PLK6 1076 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 FADS2P1A8MWK0 482 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 FFAR2O15552 330 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 PEX11AO75192 247 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 ENTPD5O75356 428 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 ITGAXP20702 1163 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 ZNF234Q14588 700 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 C18orf21Q32NC0 220 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-225ENST00000494465 KHDC1Q4VXA5 237 aaKnown RBP16.28■□□□□ 0.2
ATG4B-225ENST00000494465 LIPIQ6XZB0 460 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 SYVN1Q86TM6 617 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 HMGCLL1Q8TB92 370 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 MAGEC3Q8TD91 643 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 TWIST2Q8WVJ9 160 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 WDR60Q8WVS4 1066 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 MYADMQ96S97 322 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 THTPAQ9BU02 230 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 SUN2Q9UH99 717 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 HCN2Q9UL51 889 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 PPM1HQ9ULR3 514 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 OARD1Q9Y530 152 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 DENND4AQ7Z401 1863 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 A0A088AWK7 358 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 ATP6AP2A0A1C7CYW4 349 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 KPNA3O00505 521 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-225ENST00000494465 SGTAO43765 313 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 ATP6AP2O75787 350 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 GRM2Q14416 872 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 GBX1Q14549 363 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 PCBP2Q15366 365 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■■■□ 19.4
ATG4B-225ENST00000494465 CRY1Q16526 586 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 PHKG1Q16816 387 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 SNX32Q86XE0 403 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 ULK2Q8IYT8 1036 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 RP9Q8TA86 221 aaKnown RBP16.28■□□□□ 0.2
ATG4B-225ENST00000494465 PANX3Q96QZ0 392 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 FAM129BQ96TA1 746 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 HGH1Q9BTY7 390 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 RIOK2Q9BVS4 552 aaKnown RBP16.28■□□□□ 0.2
ATG4B-225ENST00000494465 FAM126AQ9BYI3 521 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-225ENST00000494465 KCTD5Q9NXV2 234 aa16.28■□□□□ 0.2
ATG4B-225ENST00000494465 EDDM13A0A1B0GTR0 161 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 PIP5K1BO14986 540 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 MTX2O75431 263 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 ESRRBO95718 433 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 MLYCDO95822 493 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 PRNPP04156 253 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 THRAP10827 490 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 ATP1B2P14415 290 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-225ENST00000494465 NFKBIAP25963 317 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 GJA4P35212 333 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 RUNX3Q13761 415 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 HERC3Q15034 1050 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 FRA10AC1Q70Z53 315 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 SCUBE1Q8IWY4 988 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 ARHGAP24Q8N264 748 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 TRAM1L1Q8N609 369 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 TMIEQ8NEW7 156 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 PPP2R3CQ969Q6 453 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 ARRDC3Q96B67 414 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 CD248Q9HCU0 757 aa16.27■□□□□ 0.2
ATG4B-225ENST00000494465 PTBP2Q9UKA9 531 aaKnown RBP16.27■□□□□ 0.2
ATG4B-225ENST00000494465 TAPBPO15533 448 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 OR56A5P0C7T3 313 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 CBSLP0DN79 551 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 XPAP23025 273 aaPredicted RBP16.27■□□□□ 0.19
ATG4B-225ENST00000494465 AOAHP28039 575 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 CBSP35520 551 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 CUL3Q13618 768 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 KPNB1Q14974 876 aaKnown RBP16.27■□□□□ 0.19
ATG4B-225ENST00000494465 TTLL9Q3SXZ7 439 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 DET1Q7L5Y6 550 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 PHYKPLQ8IUZ5 450 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 FAM161BQ96MY7 647 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 NSUN3Q9H649 340 aaKnown RBP16.27■□□□□ 0.19
ATG4B-225ENST00000494465 AKTIPQ9H8T0 292 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 FBRSL1Q9HCM7 1045 aaKnown RBP16.27■□□□□ 0.19
ATG4B-225ENST00000494465 SLC7A8Q9UHI5 535 aa16.27■□□□□ 0.19
ATG4B-225ENST00000494465 SPTBN5Q9NRC6 3674 aaKnown RBP16.26■□□□□ 0.19
ATG4B-225ENST00000494465 UBDO15205 165 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms