RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TFAP2BQ92481 460 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 FGF11Q92914 225 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 SCAMP4Q969E2 229 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 SKA1Q96BD8 255 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 NXPE2Q96DL1 559 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 NAF1Q96HR8 494 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 DCLRE1CQ96SD1 692 aaKnown RBP5.28□□□□□ -1.56
PTCD3-219ENST00000494323 ZSWIM1Q9BR11 485 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 MIS12Q9H081 205 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 SIK2Q9H0K1 926 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 GPR35Q9HC97 309 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 SLAMF7Q9NQ25 335 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 GDF3Q9NR23 364 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 CFAP45Q9UL16 551 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 NAALADL1Q9UQQ1 740 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 CA5BQ9Y2D0 317 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 LRCH1Q9Y2L9 728 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 CEP83Q9Y592 693 aa5.28□□□□□ -1.56
PTCD3-219ENST00000494323 PIEZO2Q9H5I5 2752 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 COL6A6A6NMZ7 2263 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 MYO18BQ8IUG5 2567 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CFAP46Q8IYW2 2715 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 A0A087WWL8 130 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 TARSL2A2RTX5 802 aaKnown RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 E9PAM4 449 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 PYCARD-AS1I3L0S3 204 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 O00370 1275 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 BTN3A1O00481 513 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 TRIM38O00635 465 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 MATN3O15232 486 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 PAPSS1O43252 624 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 RTN2O75298 545 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 AGFG2O95081 481 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 MOCS2O96007 188 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CHEK2O96017 543 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 IL1BP01584 269 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 FYNP06241 537 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 HSP90AA1P07900 732 aaKnown RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 VDRP11473 427 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 KRT10P13645 584 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 PLA2G2AP14555 144 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 GOT1P17174 413 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CKMT2P17540 419 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 GCSHP23434 173 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 SLC6A2P23975 617 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ACRV1P26436 265 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 GTF2H1P32780 548 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ARRB1P49407 418 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ACADVLP49748 655 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 STK19P49842 368 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 MXI1P50539 228 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CCR5P51681 352 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 NDUFA8P51970 172 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 DAOAP59103 153 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 NOMO3P69849 1222 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CXADRP78310 365 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 NUCB2P80303 420 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ECT2LQ008S8 904 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 NHLH2Q02577 135 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 SLC13A2Q13183 592 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CUL2Q13617 745 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 HABP2Q14520 560 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ACCSLQ4AC99 568 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CBWD6Q4V339 395 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 DCAF6Q58WW2 860 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CBWD3Q5JTY5 395 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CBWD5Q5RIA9 395 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 MPP7Q5T2T1 576 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 AGAP9Q5VTM2 703 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 SYPL2Q5VXT5 272 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF585AQ6P3V2 769 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 TMEM270Q6UE05 265 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 PCSK4Q6UW60 755 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF783Q6ZMS7 281 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 RHOT2Q8IXI1 618 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 LGI2Q8N0V4 545 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 SLC25A45Q8N413 288 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF843Q8N446 348 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 TTC39CQ8N584 583 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ATP11CQ8NB49 1132 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 OR2T34Q8NGX1 318 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 SLC35F5Q8WV83 523 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 KLK6Q92876 244 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 TMEM41AQ96HV5 264 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 KLC2Q9H0B6 622 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 CNGB3Q9NQW8 809 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 SACM1LQ9NTJ5 587 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 XPO7Q9UIA9 1087 aaKnown RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 SCML1Q9UN30 329 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 HPSEQ9Y251 543 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 TSC22D4Q9Y3Q8 395 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 PCDHGA1Q9Y5H4 931 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 KIF26BQ2KJY2 2108 aa5.27□□□□□ -1.57
PTCD3-219ENST00000494323 ASH1LQ9NR48 2969 aaKnown RBP5.27□□□□□ -1.57
PTCD3-219ENST00000494323 EDDM13A0A1B0GTR0 161 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CYSRT1A8MQ03 144 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CAPN9O14815 690 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 MUSKO15146 869 aa5.26□□□□□ -1.57
PTCD3-219ENST00000494323 CETN3O15182 167 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms