RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CLCA4Q14CN2 919 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 LRIT3Q3SXY7 679 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 CRY2Q49AN0 593 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 KCTD21Q4G0X4 260 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 AARDQ4LEZ3 155 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 ZRANB3Q5FWF4 1079 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 XKR3Q5GH77 459 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 ATAD3BQ5T9A4 648 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 LAIR1Q6GTX8 287 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 AFTPHQ6ULP2 937 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 ISLR2Q6UXK2 745 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 KDM7AQ6ZMT4 941 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 SEPT14Q6ZU15 432 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 KRT28Q7Z3Y7 464 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 TLK2Q86UE8 772 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 TRIM74Q86UV6 250 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 TRIM73Q86UV7 250 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 COMTD1Q86VU5 262 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 CD302Q8IX05 232 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 MB21D2Q8IYB1 491 aaPredicted RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 IZUMO1Q8IYV9 350 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 FAM9CQ8IZT9 166 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 EIF1ADQ8N9N8 165 aaKnown RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 ATAD1Q8NBU5 361 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 CAGE1Q8TC20 777 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 SLC26A7Q8TE54 656 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 SOCS4Q8WXH5 440 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 CPT1BQ92523 772 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 RFKQ969G6 155 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 DTNBP1Q96EV8 351 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 EEF2KMTQ96G04 330 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 CFAP57Q96MR6 1250 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 AGAP2Q99490 1192 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 RAD9AQ99638 391 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 JPH2Q9BR39 696 aaPredicted RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 NAA11Q9BSU3 229 aaPredicted RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 NUP58Q9BVL2 599 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 MRPL1Q9BYD6 325 aaKnown RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 PUS3Q9BZE2 481 aaKnown RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 GLT8D2Q9H1C3 349 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 TRPV6Q9H1D0 765 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 VPS16Q9H269 839 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 FOXP1Q9H334 677 aaPredicted RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 TOR3AQ9H497 397 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 DENND2DQ9H6A0 471 aaPredicted RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 LRRC40Q9H9A6 602 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 LTB4R2Q9NPC1 389 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 CENPMQ9NSP4 180 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 ABHD10Q9NUJ1 306 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 RNF14Q9UBS8 474 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 BAIAP2L1Q9UHR4 511 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 ATP6V1HQ9UI12 483 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 MAD2L2Q9UI95 211 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 ING1Q9UK53 422 aaPredicted RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 ITGA11Q9UKX5 1188 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 CCPG1Q9ULG6 757 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 SLC8A2Q9UPR5 921 aa4.77□□□□□ -1.65
RTN4-215ENST00000491592 SRPRBQ9Y5M8 271 aaKnown RBP4.77□□□□□ -1.65
RTN4-215ENST00000491592 GRIN2DO15399 1336 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 KDM3AQ9Y4C1 1321 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 TRBC2A0A5B9 178 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 OR6C76A6NM76 312 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 H0YIN7 160 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 CXCL11O14625 94 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 ATP2A1O14983 1001 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 FOXN1O15353 648 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 BCAT2O15382 392 aaPredicted RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 RNMTO43148 476 aaKnown RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 CIDEAO60543 219 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 ZC3H11AO75152 810 aaKnown RBP eCLIP4.76□□□□□ -1.654e-32■■■□□ 15
RTN4-215ENST00000491592 VNN1O95497 513 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 GYPCP04921 128 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 FESP07332 822 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 IL6RP08887 468 aaPredicted RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 ARP10275 920 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 PCNAP12004 261 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 ZFXP17010 805 aaPredicted RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 TCP1P17987 556 aaKnown RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 EGR1P18146 543 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 PRKACBP22694 351 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 PTPN3P26045 913 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 CORO1AP31146 461 aaKnown RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 LIPAP38571 399 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 NRIP1P48552 1158 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 METAP2P50579 478 aaKnown RBP eCLIP4.76□□□□□ -1.65
RTN4-215ENST00000491592 PGDP52209 483 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 CAPZA1P52907 286 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 RPL7AP62424 266 aaKnown RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 ASIC1P78348 528 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 ARHGAP8P85298 464 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 PLD1Q13393 1074 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 DDX39BQ13838 428 aaKnown RBP4.76□□□□□ -1.65
RTN4-215ENST00000491592 DPYSQ14117 519 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 RPS6KA2Q15349 733 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 SNCBQ16143 134 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 CEP85LQ5SZL2 805 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 SPATA46Q5T0L3 261 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 TREML2Q5T2D2 321 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 SLC9A4Q6AI14 798 aa4.76□□□□□ -1.65
RTN4-215ENST00000491592 NCAPH2Q6IBW4 605 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms