RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TMEM126BQ8IUX1 230 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 DENND6AQ8IWF6 608 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 PPHLN1Q8NEY8 458 aaKnown RBP22.51■■□□□ 1.19
USF3-203ENST00000491165 LRGUKQ96M69 825 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 SUN2Q9UH99 717 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 ANKRD66B4E2M5 251 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 AP1G1O43747 822 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 NDST3O95803 873 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 PDGFBP01127 241 aaPredicted RBP22.51■■□□□ 1.19
USF3-203ENST00000491165 EPOP01588 193 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 JUNP05412 331 aaKnown RBP22.51■■□□□ 1.19
USF3-203ENST00000491165 ENO3P13929 434 aaPredicted RBP22.51■■□□□ 1.19
USF3-203ENST00000491165 MRPS22P82650 360 aaKnown RBP22.51■■□□□ 1.19
USF3-203ENST00000491165 CTBP1Q13363 440 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 ART3Q13508 389 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 ZNF460Q14592 562 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 AP1ARQ63HQ0 302 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 OR8D1Q8WZ84 308 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 NCSTNQ92542 709 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 GPR78Q96P69 363 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 WDR41Q9HAD4 459 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 EFCAB1Q9HAE3 211 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 CFLARO15519 480 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 NPHS1O60500 1241 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 ALPIP09923 528 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 PABPC4LP0CB38 370 aaKnown RBP22.5■■□□□ 1.19
USF3-203ENST00000491165 RAD51Q06609 339 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 ARMC12Q5T9G4 340 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 CEP97Q8IW35 865 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 CCNYL1Q8N7R7 359 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 NXNL1Q96CM4 212 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 RMDN1Q96DB5 314 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 MRPL46Q9H2W6 279 aaKnown RBP22.5■■□□□ 1.19
USF3-203ENST00000491165 Q9H521 79 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 ARIH1Q9Y4X5 557 aaPredicted RBP22.5■■□□□ 1.19
USF3-203ENST00000491165 SPO11Q9Y5K1 396 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 MYO15AQ9UKN7 3530 aa22.5■■□□□ 1.19
USF3-203ENST00000491165 C15orf38-AP3S2A0A0A6YYH1 394 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 AURKAO14965 403 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 DENRO43583 198 aaKnown RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 CTPS1P17812 591 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 PKNOX1P55347 436 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 ARPINQ7Z6K5 226 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 MARVELD2Q8N4S9 558 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 CATSPER1Q8NEC5 780 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 FLCNQ8NFG4 579 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 SHDQ96IW2 340 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 MARK4Q96L34 752 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 ZNF641Q96N77 438 aaPredicted RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 TRPC5OSA6NMA1 111 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 KPNA3O00505 521 aaPredicted RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 HLA-DPA1P20036 260 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 ME2P23368 584 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 ARCN1P48444 511 aaKnown RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 CEACAM7Q14002 265 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 CNGA3Q16281 694 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 ESRP1Q6NXG1 681 aaKnown RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 PTCD2Q8WV60 388 aaKnown RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 DLG3Q92796 817 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 ARRDC3Q96B67 414 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 RSPH9Q9H1X1 276 aaPredicted RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 NCKIPSDQ9NZQ3 722 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 MMP17Q9ULZ9 603 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 TCAF1Q9Y4C2 921 aa22.49■■□□□ 1.19
USF3-203ENST00000491165 COPG1Q9Y678 874 aaKnown RBP22.49■■□□□ 1.19
USF3-203ENST00000491165 SYNCRIPO60506 623 aaKnown RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 KPNA2P52292 529 aaKnown RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 NUMA1Q14980 2115 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 TLR1Q15399 786 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 TSTD2Q5T7W7 516 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 TRIM67Q6ZTA4 783 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 PARS2Q7L3T8 475 aaKnown RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 BHLHE22Q8NFJ8 381 aaPredicted RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 MDGA1Q8NFP4 955 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 ELMO2Q96JJ3 720 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 UHRF1Q96T88 793 aaPredicted RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 A0A087X1B8 175 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 A8MX80 341 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 FGF1P05230 155 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 PAMP19021 973 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 ARNTP27540 789 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 SLC1A2P43004 574 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 PSMD8P48556 350 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 ZNF805Q5CZA5 627 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 PIWIL4Q7Z3Z4 852 aaKnown RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 TMIEQ8NEW7 156 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 PJA1Q8NG27 643 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 LRIG1Q96JA1 1093 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 MRPL57Q9BQC6 102 aaKnown RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 MRM3Q9HC36 420 aaKnown RBP22.48■■□□□ 1.19
USF3-203ENST00000491165 RIMS3Q9UJD0 308 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 RAB26Q9ULW5 256 aa22.48■■□□□ 1.19
USF3-203ENST00000491165 PRNPP04156 253 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 DPP6P42658 865 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 DYNC1I2Q13409 638 aaKnown RBP22.47■■□□□ 1.19
USF3-203ENST00000491165 CRY1Q16526 586 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 SH2D4BQ5SQS7 431 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 SDE2Q6IQ49 451 aa22.47■■□□□ 1.19
USF3-203ENST00000491165 TRMT11Q7Z4G4 463 aaKnown RBP22.47■■□□□ 1.19
USF3-203ENST00000491165 SPATA6LQ8N4H0 392 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms