RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.97□□□□□ -1.29
PDLIM1-203ENST00000490391 OR12D3Q9UGF7 316 aa6.97□□□□□ -1.29
PDLIM1-203ENST00000490391 STAP1Q9ULZ2 295 aa6.97□□□□□ -1.29
PDLIM1-203ENST00000490391 KCNK6Q9Y257 313 aa6.97□□□□□ -1.29
PDLIM1-203ENST00000490391 PRKAB1Q9Y478 270 aa6.97□□□□□ -1.29
PDLIM1-203ENST00000490391 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.97□□□□□ -1.29
PDLIM1-203ENST00000490391 CCDC78A2IDD5 438 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 OR5K4A6NMS3 321 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 CETN3O15182 167 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 SLC16A3O15427 465 aaKnown RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 MED7O43513 233 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 CREB3O43889 395 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 KLHL41O60662 606 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 IGLV1-40P01703 118 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 SLC2A4P14672 509 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 XRCC1P18887 633 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 SERPINA4P29622 427 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 GNA15P30679 374 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 OTX2P32243 289 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 CSNK1DP48730 415 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 GSDMDP57764 484 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 ACY1Q03154 408 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 NCF4Q15080 339 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 RESP18Q5W5W9 173 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 RWDD4Q6NW29 188 aaKnown RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 RPUSD3Q6P087 351 aaKnown RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 MEX3BQ6ZN04 569 aaKnown RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 RFLNAQ6ZTI6 216 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 CHST15Q7LFX5 561 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 TECPR1Q7Z6L1 1165 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 SRLQ86TD4 932 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 TMEM126BQ8IUX1 230 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 PASD1Q8IV76 773 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 AVL9Q8NBF6 648 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 SIDT2Q8NBJ9 832 aaKnown RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 CLEC1AQ8NC01 280 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 C1orf131Q8NDD1 294 aaKnown RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 DNAJB14Q8TBM8 379 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 ADAMTS18Q8TE60 1221 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 UBXN4Q92575 508 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 ZNF501Q96CX3 271 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 FER1L6-AS2Q96M78 137 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 MLPHQ9BV36 600 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 RAB33BQ9H082 229 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 ATP13A3Q9H7F0 1226 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 CCM2LQ9NUG4 571 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 ZNF624Q9P2J8 865 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 ADGRE2Q9UHX3 823 aa6.96□□□□□ -1.3
PDLIM1-203ENST00000490391 GOLGA6CA6NDK9 693 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 GOLGA6BA6NDN3 693 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 WASH4PA8MWX3 477 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 PSMD11O00231 422 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 SNX2O60749 519 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 KLK3P07288 261 aaPredicted RBP6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 GOLGA6DP0CG33 693 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 KRT5P13647 590 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 AMD1P17707 334 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 SYT1P21579 422 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 VIPR1P32241 457 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 GPR1P46091 355 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 POLR2LP62875 67 aaKnown RBP6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 TUBB4BP68371 445 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 ADAM8P78325 824 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 ABRQ12979 859 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 TUBB2AQ13885 445 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 LONRF1Q17RB8 773 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 ZNF789Q5FWF6 425 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 IRGCQ6NXR0 463 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 GFRALQ6UXV0 394 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 PHLDB2Q86SQ0 1253 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 SYTL1Q8IYJ3 562 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 CEP57L1Q8IYX8 460 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 D2HGDHQ8N465 521 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 RTL3Q8N8U3 475 aaKnown RBP6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 TSEN2Q8NCE0 465 aaKnown RBP6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 NINJ1Q92982 152 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 SNX21Q969T3 373 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 ZDHHC12Q96GR4 267 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 PCMTD1Q96MG8 357 aaPredicted RBP6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 IP6K3Q96PC2 410 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 AGAP2Q99490 1192 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 TUBB2BQ9BVA1 445 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 AKTIPQ9H8T0 292 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 KCND1Q9NSA2 647 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 TMEM51Q9NW97 253 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 P4HTMQ9NXG6 502 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 GOLGA6AQ9NYA3 693 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 UBA2Q9UBT2 640 aaPredicted RBP6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 SH3BGRL2Q9UJC5 107 aa6.95□□□□□ -1.3
PDLIM1-203ENST00000490391 HCFC1P51610 2035 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 SVEP1Q4LDE5 3571 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 NOTCH1P46531 2555 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 NPIPB15A6NHN6 443 aaPredicted RBP6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 BECN2A8MW95 431 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 J3KR12 359 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 HTRA2O43464 458 aaPredicted RBP6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 UNC5CO95185 931 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 YEATS4O95619 227 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 MYL1P05976 194 aa6.94□□□□□ -1.3
PDLIM1-203ENST00000490391 ACP5P13686 325 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms