RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TMCO6Q96DC7 493 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TTC14Q96N46 770 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 GCNAQ96QF7 691 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 ABHD1Q96SE0 405 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TUBA1CQ9BQE3 449 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 APOL6Q9BWW8 343 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 SLCO5A1Q9H2Y9 848 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 MMP27Q9H306 513 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 LRRC4Q9HBW1 653 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TCP11L1Q9NUJ3 509 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 KLHL9Q9P2J3 617 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 LARSQ9P2J5 1176 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 POLG2Q9UHN1 485 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 RALYQ9UKM9 306 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 PPIEQ9UNP9 301 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 DLGAP4Q9Y2H0 992 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 GPR75-ASB3A0A0A6YYF3 556 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 OR2M5A3KFT3 312 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 SMTNL1A8MU46 457 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 MAGEB17A8MXT2 336 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 ANKRD66B4E2M5 251 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 TMEM178BH3BS89 294 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 PLK4O00444 970 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 EIF3DO15371 548 aaKnown RBP eCLIP3.79□□□□□ -1.8
CD46-216ENST00000490278 P4HA2O15460 535 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 TIMM44O43615 452 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 ZWINTO95229 277 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 ADRB2P07550 413 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 VPREB1P12018 145 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 NR2F2P24468 414 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 KRT20P35900 424 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 SNRPEP62304 92 aaKnown RBP3.79□□□□□ -1.8
CD46-216ENST00000490278 SIRPAP78324 504 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 FAM109BQ6ICB4 259 aaPredicted RBP3.79□□□□□ -1.8
CD46-216ENST00000490278 NAA16Q6N069 864 aaPredicted RBP3.79□□□□□ -1.8
CD46-216ENST00000490278 RAD9BQ6WBX8 426 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 LDB1Q86U70 411 aaPredicted RBP3.79□□□□□ -1.8
CD46-216ENST00000490278 GUF1Q8N442 669 aaKnown RBP3.79□□□□□ -1.8
CD46-216ENST00000490278 OR52I2Q8NH67 350 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 SECTM1Q8WVN6 248 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 ERP27Q96DN0 273 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 SLC22A12Q96S37 553 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 CDRT15Q96T59 188 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 KLHL4Q9C0H6 718 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 SEMA6AQ9H2E6 1030 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 PPIL3Q9H2H8 161 aaKnown RBP3.79□□□□□ -1.8
CD46-216ENST00000490278 DENND2DQ9H6A0 471 aaPredicted RBP3.79□□□□□ -1.8
CD46-216ENST00000490278 FKRPQ9H9S5 495 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 SLC35C2Q9NQQ7 365 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 KLHL1Q9NR64 748 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 YIPF1Q9Y548 306 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 FAM169AQ9Y6X4 670 aa3.79□□□□□ -1.8
CD46-216ENST00000490278 hCG_1809904A0A1W2PP81 198 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 A0A1W2PPE2 198 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 A0A1W2PR64 198 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 ASPDHA6ND91 283 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 C15orf62A8K5M9 175 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 PRAC2D3DTV9 90 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 H0YIN7 160 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 PLOD3O60568 738 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 ZNF23P17027 643 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 GJA1P17302 382 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 GM2AP17900 193 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 MATR3P43243 847 aaKnown RBP eCLIP3.78□□□□□ -1.85e-7■■■■■ 27
CD46-216ENST00000490278 LIG4P49917 911 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 FUT6P51993 359 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 FAM171BQ6P995 826 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 KRT74Q7RTS7 529 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 EXOC3L1Q86VI1 746 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 NAGSQ8N159 534 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 GBGT1Q8N5D6 347 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 POMGNT2Q8NAT1 580 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 LPGAT1Q92604 370 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 FAM84BQ96KN1 310 aaPredicted RBP3.78□□□□□ -1.8
CD46-216ENST00000490278 SERINC2Q96SA4 455 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 EVA1AQ9H8M9 152 aa3.78□□□□□ -1.8
CD46-216ENST00000490278 WBP11Q9Y2W2 641 aaKnown RBP3.78□□□□□ -1.8
CD46-216ENST00000490278 ASTN2O75129 1339 aaPredicted RBP3.77□□□□□ -1.81
CD46-216ENST00000490278 ZNF541Q9H0D2 1346 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 PRAMEF11O60813 436 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 CREG1O75629 220 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 WISP2O76076 250 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 BMP10O95393 424 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 BCL10O95999 233 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 ABCB1P08183 1280 aaPredicted RBP3.77□□□□□ -1.81
CD46-216ENST00000490278 AHRP35869 848 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 ARCN1P48444 511 aaKnown RBP3.77□□□□□ -1.81
CD46-216ENST00000490278 ZNF132P52740 706 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 TERF1P54274 439 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 MLLT10P55197 1068 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 KRTAP10-9P60411 292 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 TROAPQ12815 778 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 MELKQ14680 651 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 STXBP5Q5T5C0 1151 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 ALS2CLQ60I27 953 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
CD46-216ENST00000490278 SLC30A6Q6NXT4 461 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 CEP57Q86XR8 500 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 RDM1Q8NG50 284 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms