RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FLNAP21333 2647 aaKnown RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 TRGV8A0A0C4DH27 118 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 A0A1W2PQ67 120 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ARHGAP42A6NI28 874 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 OR52A4PA6NMU1 304 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 FADS2P1A8MWK0 482 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 CCL21O00585 134 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PGLSO95336 258 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 LCA5LO95447 670 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 CYP11B1P15538 503 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SCTRP47872 440 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ARL4DP49703 201 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 CLCNKAP51800 687 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 OTUD4Q01804 1114 aaKnown RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SLC10A7Q0GE19 358 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ABRQ12979 859 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 CDC16Q13042 620 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 NCF4Q15080 339 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 CDSNQ15517 529 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PLA2G4EQ3MJ16 856 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF648Q5T619 568 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ISM2Q6H9L7 571 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 KLHL10Q6JEL2 608 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 USP45Q70EL2 814 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 NLRP8Q86W28 1048 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ARHGAP12Q8IWW6 846 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SYTL1Q8IYJ3 562 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PGBD5Q8N414 524 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 D2HGDHQ8N465 521 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 CLIP3Q96DZ5 547 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SPATA32Q96LK8 384 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 FER1L6-AS2Q96M78 137 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PCMTD1Q96MG8 357 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 GSDMAQ96QA5 445 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 WDR24Q96S15 920 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 GRIP2Q9C0E4 1043 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 RMI1Q9H9A7 625 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SP110Q9HB58 689 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 MCCC2Q9HCC0 563 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ARFGAP3Q9NP61 516 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SIX2Q9NPC8 291 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 OLAHQ9NV23 265 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PCMTD2Q9NV79 361 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ATXN10Q9UBB4 475 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 DNAJC12Q9UKB3 198 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 NCOA6Q14686 2063 aaPredicted RBP8.96□□□□□ -0.97
SSBP1-212ENST00000489378 PCM1Q15154 2024 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 CCDC78A2IDD5 438 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 PDZK1P1A8MUH7 402 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 DFFAO00273 331 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 PCDH17O14917 1159 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 FGF10O15520 208 aaPredicted RBP8.96□□□□□ -0.98
SSBP1-212ENST00000489378 LDB2O43679 373 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 NUAK1O60285 661 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 KLF7O75840 302 aaPredicted RBP8.96□□□□□ -0.98
SSBP1-212ENST00000489378 LSM8O95777 96 aaKnown RBP8.96□□□□□ -0.98
SSBP1-212ENST00000489378 PYGLP06737 847 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 ZNF8P17098 575 aaPredicted RBP8.96□□□□□ -0.98
SSBP1-212ENST00000489378 PON1P27169 355 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 TDGF1P3P51864 188 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 STC1P52823 247 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 NOMO3P69849 1222 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 HSD11B2P80365 405 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 Q0VFX4 171 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 RFTN1Q14699 578 aaPredicted RBP8.96□□□□□ -0.98
SSBP1-212ENST00000489378 LBRQ14739 615 aaKnown RBP8.96□□□□□ -0.98
SSBP1-212ENST00000489378 ZNF169Q14929 603 aaPredicted RBP8.96□□□□□ -0.98
SSBP1-212ENST00000489378 SCYL2Q6P3W7 929 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 CRTC3Q6UUV7 619 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 FAM180AQ6UWF9 173 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 KMT5CQ86Y97 462 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 TMEM151BQ8IW70 566 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 NPWQ8N729 165 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 DNAJB14Q8TBM8 379 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 PPP4R1Q8TF05 950 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 CHTF18Q8WVB6 975 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 PIH1D2Q8WWB5 315 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 NELFBQ8WX92 580 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 CPT1BQ92523 772 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 CNDP1Q96KN2 507 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 MDFIQ99750 246 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 POT1Q9NUX5 634 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 P4HTMQ9NXG6 502 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 FZD10Q9ULW2 581 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 PPIL1Q9Y3C6 166 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 DYRK1BQ9Y463 629 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 ANKRD12Q6UB98 2062 aa8.96□□□□□ -0.98
SSBP1-212ENST00000489378 STAB1Q9NY15 2570 aa8.95□□□□□ -0.98
SSBP1-212ENST00000489378 NSD1Q96L73 2696 aaPredicted RBP8.95□□□□□ -0.98
SSBP1-212ENST00000489378 TMEM200CA6NKL6 621 aa8.95□□□□□ -0.98
SSBP1-212ENST00000489378 K7ELQ4 463 aaPredicted RBP8.95□□□□□ -0.98
SSBP1-212ENST00000489378 KLHL41O60662 606 aa8.95□□□□□ -0.98
SSBP1-212ENST00000489378 GNA14O95837 355 aa8.95□□□□□ -0.98
SSBP1-212ENST00000489378 PDHA1P08559 390 aa8.95□□□□□ -0.98
SSBP1-212ENST00000489378 RPL10P27635 214 aaKnown RBP8.95□□□□□ -0.98
SSBP1-212ENST00000489378 RFC1P35251 1148 aaPredicted RBP8.95□□□□□ -0.98
SSBP1-212ENST00000489378 RENBPP51606 427 aa8.95□□□□□ -0.98
SSBP1-212ENST00000489378 DRG2P55039 364 aaKnown RBP8.95□□□□□ -0.98
SSBP1-212ENST00000489378 SOX8P57073 446 aa8.95□□□□□ -0.98
SSBP1-212ENST00000489378 FOXL2P58012 376 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms