RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CDKL4Q5MAI5 379 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 KANK2Q63ZY3 851 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ANKS6Q68DC2 871 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PRMT9Q6P2P2 845 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 TMEM207Q6UWW9 146 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 LARP4Q71RC2 724 aaKnown RBP eCLIP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 GAREM2Q75VX8 874 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 GRASPQ7Z6J2 395 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ADAMTSL2Q86TH1 951 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 KBTBD6Q86V97 674 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 SNX32Q86XE0 403 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 DSELQ8IZU8 1212 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 RBFAQ8N0V3 343 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 FBXO39Q8N4B4 442 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 CARNMT1Q8N4J0 409 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 GOLM1Q8NBJ4 401 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PCYOX1LQ8NBM8 494 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 CATSPER1Q8NEC5 780 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 FBXO27Q8NI29 283 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 DTX3LQ8TDB6 740 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PTERQ96BW5 349 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 OTUB2Q96DC9 234 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 C19orf60Q96EN9 201 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 MYO19Q96H55 970 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 BIRC8Q96P09 236 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 MYADMQ96S97 322 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF184Q99676 751 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 P2RY12Q9H244 342 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 EPHX3Q9H6B9 360 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 WDR55Q9H6Y2 383 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ATP13A3Q9H7F0 1226 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 S100A14Q9HCY8 104 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF334Q9HCZ1 680 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 SPATS2LQ9NUQ6 558 aaKnown RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 TRMT6Q9UJA5 497 aaKnown RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 HS3ST2Q9Y278 367 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PPIL1Q9Y3C6 166 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF711Q9Y462 761 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 KCTD3Q9Y597 815 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 CPQQ9Y646 472 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 COPG1Q9Y678 874 aaKnown RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 SLC30A1Q9Y6M5 507 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 MUC3AQ02505 3323 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 HELZP42694 1942 aaKnown RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 TRBV5-4A0A0C4DH59 114 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 A0A0J9YYE9 177 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 UBA6A0AVT1 1052 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 OR51F1A6NGY5 319 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 CAPN8A6NHC0 703 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 AGAP14A8MT82 685 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 C2CD4DB7Z1M9 353 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 H0Y3Z8 333 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 PSMD12O00232 456 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 NEMP1O14524 444 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 GIPC1O14908 333 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 AZIN1O14977 448 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 MATN4O95460 622 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 NPPAP01160 153 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 TRBC1P01850 177 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 PDHA1P08559 390 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SNRPB2P08579 225 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 RPS17P08708 135 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 CBSLP0DN79 551 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 LAMP2P13473 410 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 GFAPP14136 432 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 HNRNPLP14866 589 aaKnown RBP eCLIP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 IDO1P14902 403 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 ITGALP20701 1170 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 MSX1P28360 303 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 MC4RP32245 332 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 CBSP35520 551 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 CSKP41240 450 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 RGS4P49798 205 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SGSHP51688 502 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SNRPD1P62314 119 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 FOXM1Q08050 763 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 TRAP1Q12931 704 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SEMA3AQ14563 771 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SMU1Q2TAY7 513 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 UGT3A2Q3SY77 523 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 ACCSLQ4AC99 568 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 PIGGQ5H8A4 983 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 NXNQ6DKJ4 435 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 GRAMD4Q6IC98 578 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 IRGCQ6NXR0 463 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 PRR23BQ6ZRT6 265 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SPATA19Q7Z5L4 167 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SNX20Q7Z614 316 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 DHDDSQ86SQ9 333 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 GALNT13Q8IUC8 556 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 RAVER1Q8IY67 606 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 POU5F2Q8N7G0 328 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 PTGR2Q8N8N7 351 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 ARL14EPQ8N8R7 260 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 OR2AP1Q8NGE2 309 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 ITFG1Q8TB96 612 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SHKBP1Q8TBC3 707 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 PIH1D2Q8WWB5 315 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms