RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CTRCQ99895 268 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 SLC40A1Q9NP59 571 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 FKBPLQ9UIM3 349 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 KCTD3Q9Y597 815 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 C5orf60A6NFR6 353 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 KCNJ13O60928 360 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 POP7O75817 140 aaKnown RBP22.58■■□□□ 1.21
COL9A3-213ENST00000489045 FTCDO95954 541 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 C9P02748 559 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 PTMAP06454 111 aaKnown RBP22.58■■□□□ 1.21
COL9A3-213ENST00000489045 AMD1P17707 334 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 AKT1P31749 480 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 HALP42357 657 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 DMPKQ09013 629 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 GPR18Q14330 331 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 CLCA4Q14CN2 919 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 SYCE1Q8N0S2 351 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 TXLNBQ8N3L3 684 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 ZSCAN1Q8NBB4 408 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 SPC24Q8NBT2 197 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 RTP4Q96DX8 246 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 TBL1YQ9BQ87 522 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 IMPACTQ9P2X3 320 aa22.58■■□□□ 1.21
COL9A3-213ENST00000489045 GOLGA6L9A6NEM1 432 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 MIF4GDA9UHW6 222 aaKnown RBP22.57■■□□□ 1.2
COL9A3-213ENST00000489045 DDX3YO15523 660 aaKnown RBP22.57■■□□□ 1.2
COL9A3-213ENST00000489045 ZNF189O75820 626 aaPredicted RBP22.57■■□□□ 1.2
COL9A3-213ENST00000489045 ANKRD34CP0C6C1 535 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 MSH3P20585 1137 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 PBLDP30039 288 aaPredicted RBP22.57■■□□□ 1.2
COL9A3-213ENST00000489045 CDC25BP30305 580 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 SPARCL1Q14515 664 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 CEACAM20Q6UY09 585 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 FAM83HQ6ZRV2 1179 aaPredicted RBP22.57■■□□□ 1.2
COL9A3-213ENST00000489045 DET1Q7L5Y6 550 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 RBM12BQ8IXT5 1001 aaKnown RBP22.57■■□□□ 1.2
COL9A3-213ENST00000489045 IL22RA1Q8N6P7 574 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 OR13C4Q8NGS5 318 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 RSC1A1Q92681 617 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 C9orf72Q96LT7 481 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 TGM7Q96PF1 710 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 PPP1R2P1Q96PQ5 205 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 ASB8Q9H765 288 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 APMAPQ9HDC9 416 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 FBXO8Q9NRD0 319 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 PSMD13Q9UNM6 376 aa22.57■■□□□ 1.2
COL9A3-213ENST00000489045 RAD1O60671 282 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 SRP72O76094 671 aaKnown RBP22.56■■□□□ 1.2
COL9A3-213ENST00000489045 CAPZBP47756 277 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 LEPRP48357 1165 aaKnown RBP22.56■■□□□ 1.2
COL9A3-213ENST00000489045 MSLNQ13421 630 aaPredicted RBP22.56■■□□□ 1.2
COL9A3-213ENST00000489045 NFE2L1Q14494 772 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 LONRF2Q1L5Z9 754 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 FNBP1LQ5T0N5 605 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 DENND5AQ6IQ26 1287 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 CACNA2D3Q8IZS8 1091 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 BEND7Q8N7W2 519 aaPredicted RBP22.56■■□□□ 1.2
COL9A3-213ENST00000489045 TTC13Q8NBP0 860 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 GPR150Q8NGU9 434 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 NAT14Q8WUY8 206 aa22.56■■□□□ 1.2
COL9A3-213ENST00000489045 ZNF514Q96K75 400 aaPredicted RBP22.56■■□□□ 1.2
COL9A3-213ENST00000489045 SIDT1Q9NXL6 827 aaKnown RBP22.56■■□□□ 1.2
COL9A3-213ENST00000489045 DNMT3AQ9Y6K1 912 aaPredicted RBP22.56■■□□□ 1.2
COL9A3-213ENST00000489045 CAPN5O15484 640 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-213ENST00000489045 CRTAMO95727 393 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 ZNF140P52738 457 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-213ENST00000489045 CYP4F2P78329 520 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 XIAPP98170 497 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 KLF1Q13351 362 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-213ENST00000489045 LINC00303Q3SY05 128 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 ARHGEF18Q6ZSZ5 1173 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 KLHDC8BQ8IXV7 354 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 FAM71DQ8N9W8 422 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 EXTL1Q92935 676 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 MED8Q96G25 268 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 PILRAQ9UKJ1 303 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 R3HDM2Q9Y2K5 976 aaKnown RBP22.55■■□□□ 1.2
COL9A3-213ENST00000489045 CAPN6Q9Y6Q1 641 aa22.55■■□□□ 1.2
COL9A3-213ENST00000489045 ITGB2P05107 769 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 LIFP15018 202 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 TMPRSS15P98073 1019 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 PDE1BQ01064 536 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 RPE65Q16518 533 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 LRRC45Q96CN5 670 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 ZPBPQ9BS86 351 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 SPRY4Q9C004 299 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 ARNT2Q9HBZ2 717 aa22.54■■□□□ 1.2
COL9A3-213ENST00000489045 TCRBV7S2A1N4TA0A589 114 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 POLR1CO15160 346 aaPredicted RBP22.53■■□□□ 1.2
COL9A3-213ENST00000489045 RASSF9O75901 435 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 SEPHS1P49903 392 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 PARP6Q2NL67 630 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 METRNLQ641Q3 311 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 KCTD11Q693B1 232 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 ZNF605Q86T29 641 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 EXD3Q8N9H8 876 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 HES6Q96HZ4 224 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 ZNF768Q9H5H4 540 aaKnown RBP22.53■■□□□ 1.2
COL9A3-213ENST00000489045 FAM8A1Q9UBU6 413 aa22.53■■□□□ 1.2
COL9A3-213ENST00000489045 FEZ2Q9UHY8 353 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms