RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 C9orf72Q96LT7 481 aa11.72□□□□□ -0.53
CCHCR1-215ENST00000488920 SPATA13Q96N96 652 aa11.72□□□□□ -0.53
CCHCR1-215ENST00000488920 ZCCHC2Q9C0B9 1178 aaKnown RBP11.72□□□□□ -0.53
CCHCR1-215ENST00000488920 APMAPQ9HDC9 416 aa11.72□□□□□ -0.53
CCHCR1-215ENST00000488920 FBXO8Q9NRD0 319 aa11.72□□□□□ -0.53
CCHCR1-215ENST00000488920 AMFRQ9UKV5 643 aa11.72□□□□□ -0.53
CCHCR1-215ENST00000488920 PSMD13Q9UNM6 376 aa11.72□□□□□ -0.53
CCHCR1-215ENST00000488920 MN1Q10571 1320 aaPredicted RBP11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 C5orf60A6NFR6 353 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 KIF1CO43896 1103 aaKnown RBP11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 RAD1O60671 282 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 KCNJ13O60928 360 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 PRAMEF1O95521 474 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 FTCDO95954 541 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 PTMAP06454 111 aaKnown RBP11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 PLA2G2AP14555 144 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 LIFP15018 202 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 MSH3P20585 1137 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 AKT1P31749 480 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 HALP42357 657 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 SEPHS1P49903 392 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 TMPRSS15P98073 1019 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 ITGA9Q13797 1035 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 NFE2L1Q14494 772 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 RPE65Q16518 533 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 TBR1Q16650 682 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 FNBP1LQ5T0N5 605 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 CEACAM20Q6UY09 585 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 PEX26Q7Z412 305 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 TMEM139Q8IV31 216 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 BEND7Q8N7W2 519 aaPredicted RBP11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 FAM71DQ8N9W8 422 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 SPC24Q8NBT2 197 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 RSC1A1Q92681 617 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 RNF31Q96EP0 1072 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 TEFMQ96QE5 360 aaKnown RBP11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 ARHGAP9Q9BRR9 750 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 DESI2Q9BSY9 194 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 SPRY4Q9C004 299 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 POT1Q9NUX5 634 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 FKBPLQ9UIM3 349 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 PILRAQ9UKJ1 303 aa11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 PACSIN2Q9UNF0 486 aaPredicted RBP11.71□□□□□ -0.53
CCHCR1-215ENST00000488920 SCN8AQ9UQD0 1980 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 POLR1CO15160 346 aaPredicted RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 RASSF9O75901 435 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 SRP72O76094 671 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 C9P02748 559 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 ITGB2P05107 769 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 ANKRD34CP0C6C1 535 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 FAM87AP0C7U9 286 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 FOXM1Q08050 763 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 DMPKQ09013 629 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 KIF5AQ12840 1032 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 MSLNQ13421 630 aaPredicted RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 DENND5AQ6IQ26 1287 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 FAM92BQ6ZTR7 304 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 TIPARPQ7Z3E1 657 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 RBM12BQ8IXT5 1001 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 UNC5BQ8IZJ1 945 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 NLGN4XQ8N0W4 816 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 UBL4BQ8N7F7 174 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 NLGN4YQ8NFZ3 816 aaPredicted RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 OR13C4Q8NGS5 318 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 TBL1YQ9BQ87 522 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 ZPBPQ9BS86 351 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 SLC12A9Q9BXP2 914 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 FAM96AQ9H5X1 160 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 ASB8Q9H765 288 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 SMOXQ9NWM0 555 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 FAM8A1Q9UBU6 413 aa11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 R3HDM2Q9Y2K5 976 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 CFAP20Q9Y6A4 193 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 DNMT3AQ9Y6K1 912 aaPredicted RBP11.7□□□□□ -0.54
CCHCR1-215ENST00000488920 TCRBV7S2A1N4TA0A589 114 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 B8ZZF3 427 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 CCL22O00626 93 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 DDX3YO15523 660 aaKnown RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 STK17BO94768 372 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 ZIC2O95409 532 aaPredicted RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 METTL18O95568 372 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 CRTAMO95727 393 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 TPH1P17752 444 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 MAP4P27816 1152 aaKnown RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 CAPZBP47756 277 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 PPP1CAP62136 330 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 SH3BP2P78314 561 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 XIAPP98170 497 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 PARP6Q2NL67 630 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 METRNLQ641Q3 311 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 IRGCQ6NXR0 463 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 ARHGEF18Q6ZSZ5 1173 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 MICALCLQ6ZW33 695 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 SYCE1Q8N0S2 351 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 TAB3Q8N5C8 712 aaPredicted RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 GPR150Q8NGU9 434 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 ZDHHC12Q96GR4 267 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms