RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 FAM237BA0A1B0GVD1 139 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 MAGEB16A2A368 324 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 TLR4O00206 839 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 ALDOAP04075 364 aaKnown RBP19.13■□□□□ 0.65
CCM2-216ENST00000488727 TEAD1P28347 426 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 RABIFP47224 123 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 ARFIP2P53365 341 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 CDK3Q00526 305 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 OVGP1Q12889 678 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 LAMB3Q13751 1172 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 CHRNA6Q15825 494 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 INSCQ1MX18 579 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 ATP13A5Q4VNC0 1218 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 CES3Q6UWW8 571 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 ADAMTSL4Q6UY14 1074 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 ASCL5Q7RTU5 278 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 RABEPKQ7Z6M1 372 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.13■□□□□ 0.65
CCM2-216ENST00000488727 FAM174AQ8TBP5 190 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 PEX13Q92968 403 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 MFSD3Q96ES6 412 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 TMEM237Q96Q45 408 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 KCNK13Q9HB14 408 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 MRM3Q9HC36 420 aaKnown RBP19.13■□□□□ 0.65
CCM2-216ENST00000488727 ZFATQ9P243 1243 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 ZFP69BQ9UJL9 534 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 TMPRSS11EQ9UL52 423 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 CNOT6Q9ULM6 557 aaKnown RBP19.13■□□□□ 0.65
CCM2-216ENST00000488727 ANKRD6Q9Y2G4 727 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 DNAH14Q0VDD8 3507 aa19.13■□□□□ 0.65
CCM2-216ENST00000488727 LRP4O75096 1905 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 H7C0S8 307 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 CHUKO15111 745 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 INPP4BO15327 924 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 PRAMEF1O95521 474 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 ATP6V1G2O95670 118 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 ITGA2BP08514 1039 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 MAGEA12P43365 314 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 YPEL5P62699 121 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 IRX4P78413 519 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 OCRLQ01968 901 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 SPEM2Q0P670 501 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 PDE1CQ14123 709 aaPredicted RBP19.12■□□□□ 0.65
CCM2-216ENST00000488727 TEAD4Q15561 434 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 DCLK2Q8N568 766 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 DTX3LQ8TDB6 740 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 FCRL3Q96P31 734 aaPredicted RBP19.12■□□□□ 0.65
CCM2-216ENST00000488727 RAB3IPQ96QF0 476 aaPredicted RBP19.12■□□□□ 0.65
CCM2-216ENST00000488727 SLC6A14Q9UN76 642 aa19.12■□□□□ 0.65
CCM2-216ENST00000488727 ZCWPW2A0A1B0GU75 182 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 TPP1O14773 563 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 SNNO75324 88 aaPredicted RBP19.11■□□□□ 0.65
CCM2-216ENST00000488727 SRP72O76094 671 aaKnown RBP19.11■□□□□ 0.65
CCM2-216ENST00000488727 UGT1A6P19224 532 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 UGT1A1P22309 533 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 UGT1A4P22310 534 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 MC4RP32245 332 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 UGT1A3P35503 534 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 UGT1A5P35504 534 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 NXPH1P58417 271 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 BST1Q10588 318 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 KIF19Q2TAC6 998 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 ANKRD20A4Q4UJ75 823 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 FAM91A1Q658Y4 838 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 CLNKQ7Z7G1 428 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 TRIM74Q86UV6 250 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 NUDCD3Q8IVD9 361 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 HDAC10Q969S8 669 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 SKA1Q96BD8 255 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 ZNF669Q96BR6 464 aaPredicted RBP19.11■□□□□ 0.65
CCM2-216ENST00000488727 TMEM120AQ9BXJ8 343 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 PARD6AQ9NPB6 346 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 SLC17A6Q9P2U8 582 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 DCDC2Q9UHG0 476 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 DCTN4Q9UJW0 460 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 APPL1Q9UKG1 709 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 SNX11Q9Y5W9 270 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 PSAT1Q9Y617 370 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 SPTY2D1-AS1A0A0U1RR47 76 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 OR51F1A6NGY5 319 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 TOR1BO14657 336 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 HGSO14964 777 aaPredicted RBP19.11■□□□□ 0.65
CCM2-216ENST00000488727 PYGLP06737 847 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 KRT16P08779 473 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 ZNF806P0C7X5 589 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 T-ENOLP0DO92 83 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 MYCLP1P12525 358 aaPredicted RBP19.11■□□□□ 0.65
CCM2-216ENST00000488727 C21orf59P57076 290 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 GRIK2Q13002 908 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 NFATC4Q14934 902 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 ARMC3Q5W041 872 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 PDPK2PQ6A1A2 396 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 CCDC91Q7Z6B0 441 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 COX14Q96I36 57 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 RBBP8Q99708 897 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 TUBB6Q9BUF5 446 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 MECRQ9BV79 373 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 CAAP1Q9H8G2 361 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 TXNDC16Q9P2K2 825 aa19.11■□□□□ 0.65
CCM2-216ENST00000488727 LNPEPQ9UIQ6 1025 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms