RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PCDHGB4Q9UN71 923 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 OR2W1Q9Y3N9 320 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 LRRC9Q6ZRR7 1453 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 BLMP54132 1417 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 CFAP43Q8NDM7 1665 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 CECR2Q9BXF3 1484 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 LOC100509620A0A075B734 347 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 LRRC72A6NJI9 287 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 ZBTB43O43298 467 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 GJB3O75712 270 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 BEST1O76090 585 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 CAMTA2O94983 1202 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 NR2F1P10589 423 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 CDH1P12830 882 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 ITGA2P17301 1181 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 ACSL1P33121 698 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 KCNC3Q14003 757 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 KLHL40Q2TBA0 621 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 KRTCAP3Q53RY4 240 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 HSP90AB3PQ58FF7 597 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 RARS2Q5T160 578 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 GPR139Q6DWJ6 353 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 GFRALQ6UXV0 394 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 TUBA1AQ71U36 451 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 TMPRSS12Q86WS5 348 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 TMEM219Q86XT9 240 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 EGFL6Q8IUX8 553 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 MCEMP1Q8IX19 187 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 RBMXL3Q8N7X1 1067 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 LSMEM1Q8N8F7 131 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 SPATA20Q8TB22 786 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 FAM84BQ96KN1 310 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 MYCBPQ99417 103 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 TUBA1CQ9BQE3 449 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 SYT17Q9BSW7 474 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 MXD3Q9BW11 206 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 MRPL1Q9BYD6 325 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 CSTL1Q9H114 145 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 LRMDAQ9H2I8 198 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 HRH4Q9H3N8 390 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 OSGEPL1Q9H4B0 414 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 RAD21L1Q9H4I0 556 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 UPF2Q9HAU5 1272 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 TMEM30AQ9NV96 361 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 RBM28Q9NW13 759 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 PAG1Q9NWQ8 432 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 PSD3Q9NYI0 1048 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 WWOXQ9NZC7 414 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 PROCRQ9UNN8 238 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 EXO1Q9UQ84 846 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 B3GALT5Q9Y2C3 310 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 HECW1Q76N89 1606 aa3.76□□□□□ -1.81
ECHDC1-217ENST00000488087 CLASP1Q7Z460 1538 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ARHGEF40Q8TER5 1519 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 CGNL1Q0VF96 1302 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 PTPN23Q9H3S7 1636 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 PRAC2D3DTV9 90 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNHIT1O43257 154 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 PLOD3O60568 738 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 MITFO75030 526 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 CSPG5O95196 566 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 GH2P01242 217 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 HLA-DOBP13765 273 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 MMP9P14780 707 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 AKR1B1P15121 316 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 CAPN2P17655 700 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ITGB6P18564 788 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 NR2F2P24468 414 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 NRIP1P48552 1158 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 GAS1P54826 345 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 CD81P60033 236 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 EEF1A1P68104 462 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 MRPS5P82675 430 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 CBX1P83916 185 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 PPP2R2BQ00005 443 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 PLIN5Q00G26 463 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 GTF2H2Q13888 395 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 KRT33BQ14525 404 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF234Q14588 700 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 MEP1AQ16819 746 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 EEF1A1P5Q5VTE0 462 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ZDHHC20Q5W0Z9 365 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 OR7E24Q6IFN5 339 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 LCN10Q6JVE6 187 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 GTF2H2CQ6P1K8 395 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 RAD9BQ6WBX8 426 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF704Q6ZNC4 412 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF771Q7L3S4 317 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 ADGRA1Q86SQ6 560 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 EXOC3L1Q86VI1 746 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 PM20D2Q8IYS1 436 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC5A8Q8N695 610 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 POC1AQ8NBT0 407 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 MNS1Q8NEH6 495 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 PRPF31Q8WWY3 499 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 SORCS1Q8WY21 1168 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 TTC14Q96N46 770 aa3.75□□□□□ -1.81
ECHDC1-217ENST00000488087 CTAGE1Q96RT6 745 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms