RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 VCLP18206 1134 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 SMAD1Q15797 465 aaKnown RBP19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 KYNUQ16719 465 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 INSCQ1MX18 579 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 ERCC6LQ2NKX8 1250 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 WDR93Q6P2C0 686 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 OGFOD3Q6PK18 319 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 BEND7Q8N7W2 519 aaPredicted RBP19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 BIRC8Q96P09 236 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 FUT8Q9BYC5 575 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 CDC42EP4Q9H3Q1 356 aaKnown RBP19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 RRAGDQ9NQL2 400 aaPredicted RBP19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 KLC4Q9NSK0 619 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 NSMCE4AQ9NXX6 385 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 GULP1Q9UBP9 304 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 GNPTGQ9UJJ9 305 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 ZFC3H1O60293 1989 aaKnown RBP19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 PIKFYVEQ9Y2I7 2098 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 ASCC3Q8N3C0 2202 aaKnown RBP19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 SLC30A4O14863 429 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 TM4SF5O14894 197 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 C1QAP02745 245 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 FTH1P02794 183 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 ESR1P03372 595 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 ACTR1BP42025 376 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 ACTR1AP61163 376 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 ZNF789Q5FWF6 425 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 C6orf132Q5T0Z8 1188 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 PIP4P1Q86T03 277 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 SLC26A11Q86WA9 606 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 FAM181AQ8N9Y4 354 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 CDKL2Q92772 493 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 CCM2Q9BSQ5 444 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 NINJ2Q9NZG7 142 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 TAAR2Q9P1P5 351 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 ZFATQ9P243 1243 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 PCOLCE2Q9UKZ9 415 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 CRYL1Q9Y2S2 319 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 COMMD10Q9Y6G5 202 aa19.05■□□□□ 0.64
PCOLCE-208ENST00000487172 COL5A1P20908 1838 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 UBA6A0AVT1 1052 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 FAM159BA6NKW6 160 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 H3BMM5 538 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 TRIM38O00635 465 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 SH3BP5O60239 455 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 HAUS5O94927 633 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 AHSGP02765 367 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 MYBL2P10244 700 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 PKMP14618 531 aaKnown RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 SDHBP21912 280 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 MCM3P25205 808 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 GABRB3P28472 473 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 STX2P32856 288 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 PHBP35232 272 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 MPP1Q00013 466 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 DEFB133Q30KQ1 61 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 ZNF658BQ4V348 819 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 METRNLQ641Q3 311 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 ZCCHC8Q6NZY4 707 aaKnown RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 SLC30A9Q6PML9 568 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 WASH2PQ6VEQ5 465 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 CAPN12Q6ZSI9 719 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 NAXDQ8IW45 347 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 EID2Q8N6I1 236 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 FAM46DQ8NEK8 389 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 BAHD1Q8TBE0 780 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 HM13Q8TCT9 377 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 RHBDD1Q8TEB9 315 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 SETD7Q8WTS6 366 aaKnown RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 NAT14Q8WUY8 206 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 PANX3Q96QZ0 392 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 TSSK1BQ9BXA7 367 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 TXLNGYQ9BZA5 131 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 WASH6PQ9NQA3 447 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 FBXO6Q9NRD1 293 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 SPATS2LQ9NUQ6 558 aaKnown RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 KCNK6Q9Y257 313 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 BTBD3Q9Y2F9 522 aa19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 ARID1BQ8NFD5 2236 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-208ENST00000487172 FFAR2O15552 330 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 CBFA2T3O75081 653 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 TUBBP07437 444 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 FAM153BP0C7A2 387 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 IDSP22304 550 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 FMO4P31512 558 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 EIF3BP55884 814 aaKnown RBP19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 ILF2Q12905 390 aaKnown RBP19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 TCEA2Q15560 299 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 PLA2G4EQ3MJ16 856 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 FAM153CQ494X1 144 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 CTSL3PQ5NE16 218 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 AGAP9Q5VTM2 703 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 PTRHD1Q6GMV3 140 aaKnown RBP19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 ABRAXAS1Q6UWZ7 409 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 TRMT10CQ7L0Y3 403 aaKnown RBP19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 C17orf82Q86X59 251 aaPredicted RBP19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 DPEP2Q9H4A9 486 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 SMYD2Q9NRG4 433 aa19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.03■□□□□ 0.64
PCOLCE-208ENST00000487172 ACSL5Q9ULC5 683 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms