RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 FAM92BQ6ZTR7 304 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 BEND7Q8N7W2 519 aaPredicted RBP24.08■■□□□ 1.45
LIME1-206ENST00000487026 DDHD1Q8NEL9 900 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 ACTL9Q8TC94 416 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 KIAA1143Q96AT1 154 aaPredicted RBP24.08■■□□□ 1.45
LIME1-206ENST00000487026 ELMO2Q96JJ3 720 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 SLC45A3Q96JT2 553 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.08■■□□□ 1.45
LIME1-206ENST00000487026 KCTD3Q9Y597 815 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 PCDHA3Q9Y5H8 950 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 DLGAP3O95886 979 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 PRKAR1AP10644 381 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 ZNF28P17035 718 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 PBLDP30039 288 aaPredicted RBP24.07■■□□□ 1.44
LIME1-206ENST00000487026 CTNNA1P35221 906 aaKnown RBP24.07■■□□□ 1.44
LIME1-206ENST00000487026 HALP42357 657 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 CAPZBP47756 277 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 GEMP55040 296 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 NAP1L1P55209 391 aaKnown RBP24.07■■□□□ 1.44
LIME1-206ENST00000487026 ITGA9Q13797 1035 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 NFE2L1Q14494 772 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 CACHD1Q5VU97 1274 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 IRGCQ6NXR0 463 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 DET1Q7L5Y6 550 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 GPR150Q8NGU9 434 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 ZNF398Q8TD17 642 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 OR6C1Q96RD1 312 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 TRIM4Q9C037 500 aa24.07■■□□□ 1.44
LIME1-206ENST00000487026 ZCCHC2Q9C0B9 1178 aaKnown RBP24.07■■□□□ 1.44
LIME1-206ENST00000487026 ZNF768Q9H5H4 540 aaKnown RBP24.07■■□□□ 1.44
LIME1-206ENST00000487026 LUC7LQ9NQ29 371 aaKnown RBP24.07■■□□□ 1.44
LIME1-206ENST00000487026 GEMIN8Q9NWZ8 242 aaKnown RBP24.07■■□□□ 1.44
LIME1-206ENST00000487026 KCNJ13O60928 360 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 ANXA9O76027 345 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 NDUFA10O95299 355 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 SFTPCP11686 197 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 COPS2P61201 443 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 PPP1CAP62136 330 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 ABHD18Q0P651 414 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 RPE65Q16518 533 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 FNBP1LQ5T0N5 605 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 AADACL2Q6P093 401 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 RBM12BQ8IXT5 1001 aaKnown RBP24.06■■□□□ 1.44
LIME1-206ENST00000487026 OR4K2Q8NGD2 314 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 OSBPL8Q9BZF1 889 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 ULBP3Q9BZM4 244 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 SPTA1P02549 2419 aa24.06■■□□□ 1.44
LIME1-206ENST00000487026 TOX3O15405 576 aaPredicted RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 PPFIA2O75334 1257 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 MSH3P20585 1137 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 LPOP22079 712 aaPredicted RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 PSMB4P28070 264 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 AKT1P31749 480 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 ZNF75DP51815 510 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 POLE2P56282 527 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 EIF3EP60228 445 aaKnown RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 DMPKQ09013 629 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 ANKRD20A2Q5SQ80 823 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 ANKRD20A1Q5TYW2 823 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 ANKRD20A3Q5VUR7 823 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 ITPRIPL1Q6GPH6 555 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 DARS2Q6PI48 645 aaKnown RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 RANBP10Q6VN20 620 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 ZDHHC12Q96GR4 267 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 PANX2Q96RD6 677 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 SLC25A18Q9H1K4 315 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 TRIT1Q9H3H1 467 aaKnown RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 FAM8A1Q9UBU6 413 aa24.05■■□□□ 1.44
LIME1-206ENST00000487026 REXO2Q9Y3B8 237 aaKnown RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 MRPS18BQ9Y676 258 aaKnown RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 CFAP20Q9Y6A4 193 aaKnown RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 ASH1LQ9NR48 2969 aaKnown RBP24.05■■□□□ 1.44
LIME1-206ENST00000487026 C2orf81A6NN90 581 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 KCNN4O15554 427 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 PRAMEF1O95521 474 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 RBP3P10745 1247 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 CTNNA2P26232 953 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 ADRA1AP35348 466 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 TAF1AQ15573 450 aaPredicted RBP24.04■■□□□ 1.44
LIME1-206ENST00000487026 ATP1A1-AS1Q5TC04 95 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 PRSS42Q7Z5A4 293 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 RASGRP3Q8IV61 690 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 ESX1Q8N693 406 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 GALNT6Q8NCL4 622 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 LACRTQ9GZZ8 138 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 ASB8Q9H765 288 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 EPHA6Q9UF33 1036 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 FKBPLQ9UIM3 349 aa24.04■■□□□ 1.44
LIME1-206ENST00000487026 DNMT3AQ9Y6K1 912 aaPredicted RBP24.04■■□□□ 1.44
LIME1-206ENST00000487026 PJA2O43164 708 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 PYGMP11217 842 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 FECHP22830 423 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 F8A1P23610 371 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 STAT5AP42229 794 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 CCR10P46092 362 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 TMPRSS15P98073 1019 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 SPARCL1Q14515 664 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 C16orf46Q6P387 395 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 C6orf15Q6UXA7 325 aaPredicted RBP24.03■■□□□ 1.44
LIME1-206ENST00000487026 RAD9BQ6WBX8 426 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms