RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CASP9P55211 416 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 RFTN2Q52LD8 501 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 PM20D1Q6GTS8 502 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 SULT1C3Q6IMI6 304 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 OR7A2PQ8NGA2 310 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 OR4K2Q8NGD2 314 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 OR10T2Q8NGX3 314 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 PROKR1Q8TCW9 393 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CHPT1Q8WUD6 406 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 EEF1AKMT1Q8WVE0 214 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 SLCO3A1Q9UIG8 710 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CDH7Q9ULB5 785 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 HHLA1C9JL84 531 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 PRSS23O95084 383 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF682O95780 498 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 F9P00740 461 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CAPN1P07384 714 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 IDO1P14902 403 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 PNPLA4P41247 253 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 RPL38P63173 70 aaKnown RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CYP4F2P78329 520 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CYP4F3Q08477 520 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 SCAPQ12770 1279 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 TRIP4Q15650 581 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 PIK3R6Q5UE93 754 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 TAF2Q6P1X5 1199 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 C10orf111Q8N326 155 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CALML6Q8TD86 181 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 KCTD13Q8WZ19 329 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 DPF3Q92784 378 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 SMARCD1Q96GM5 515 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 FAM118AQ9NWS6 357 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 BRWD3Q6RI45 1802 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 A8MV72 311 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CLDN25C9JDP6 229 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 TBC1D4O60343 1298 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 GPIP06744 558 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 GTF2E2P29084 291 aaKnown RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 SCNN1AP37088 669 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 EPS8Q12929 822 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 KCNJ8Q15842 424 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 C6orf136Q5SQH8 315 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 KDELC1Q6UW63 502 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 TAS2R42Q7RTR8 314 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 TTC9BQ8N6N2 239 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 CHDHQ8NE62 594 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 PNPT1Q8TCS8 783 aaKnown RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 RPRD1AQ96P16 312 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 C6orf62Q9GZU0 229 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 INTS10Q9NVR2 710 aaKnown RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 TUBA8Q9NY65 449 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 PTBP2Q9UKA9 531 aaKnown RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 MYLKQ15746 1914 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 IRAK2O43187 625 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 TBX1O43435 398 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 DEAF1O75398 565 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-211ENST00000486901 DLGAP3O95886 979 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ALPLP05186 524 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 NEK2P51955 445 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 LCP2Q13094 533 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ADPRMQ3LIE5 342 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 C6orf141Q5SZD1 244 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 NIPAL1Q6NVV3 410 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 Q6ZPB1 254 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-211ENST00000486901 MAGED4Q96JG8 741 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 RNF167Q9H6Y7 350 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 SLC6A13Q9NSD5 602 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 FAM8A1Q9UBU6 413 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF451Q9Y4E5 1061 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 VCANP13611 3396 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 A0A0D9SEW6 157 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 UPK1AO00322 258 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 GPR182O15218 404 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 AQP9O43315 295 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 LDB2O43679 373 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ABCB7O75027 752 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 NDUFS3O75489 264 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 BMP4P12644 408 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 GP2P55259 537 aaKnown RBP12.23□□□□□ -0.45
HSPG2-211ENST00000486901 RAPSNQ13702 412 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ZRANB3Q5FWF4 1079 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 LETMD1Q6P1Q0 360 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 SPATC1Q76KD6 591 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 NANOGNBQ7Z5D8 188 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF555Q8NEP9 628 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF420Q8TAQ5 688 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-211ENST00000486901 MCOLN3Q8TDD5 553 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 OSCP1Q8WVF1 389 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 IGSF8Q969P0 613 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 NODALQ96S42 347 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ATP13A3Q9H7F0 1226 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 AFF4Q9UHB7 1163 aaKnown RBP12.23□□□□□ -0.45
HSPG2-211ENST00000486901 NEU3Q9UQ49 428 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 PCDHGC4Q9Y5F7 938 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 UNC80Q8N2C7 3258 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms