RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 E5RI56 91 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 LMO7DNF2Z398 122 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 H3BMM5 538 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 OR1I1O60431 355 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 SNX2O60749 519 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 POP7O75817 140 aaKnown RBP11.21□□□□□ -0.61
NUP50-216ENST00000486184 FUCA1P04066 466 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 GSTM1P09488 218 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 SLC2A4P14672 509 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 SDHBP21912 280 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 IDSP22304 550 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.61
NUP50-216ENST00000486184 AK4P27144 223 aaPredicted RBP11.21□□□□□ -0.61
NUP50-216ENST00000486184 ECHS1P30084 290 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 FMO4P31512 558 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 LIMK1P53667 647 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 GSTM4Q03013 218 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 BIRC2Q13490 618 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 TMED2Q15363 201 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 KYNUQ16719 465 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 ERCC6LQ2NKX8 1250 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 TRMT10BQ6PF06 316 aaKnown RBP11.21□□□□□ -0.61
NUP50-216ENST00000486184 LVRNQ6Q4G3 990 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 KIAA0408Q6ZU52 694 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 NAXDQ8IW45 347 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 DENND6AQ8IWF6 608 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 CTAGE3PQ8IX95 158 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 GSPT2Q8IYD1 628 aaKnown RBP11.21□□□□□ -0.61
NUP50-216ENST00000486184 EID2Q8N6I1 236 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 BEND7Q8N7W2 519 aaPredicted RBP11.21□□□□□ -0.61
NUP50-216ENST00000486184 FAM46DQ8NEK8 389 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 GPBAR1Q8TDU6 330 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 RHBDD1Q8TEB9 315 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 NAT14Q8WUY8 206 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 CCM2Q9BSQ5 444 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 CDC42EP4Q9H3Q1 356 aaKnown RBP11.21□□□□□ -0.61
NUP50-216ENST00000486184 DPEP2Q9H4A9 486 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 LRRC4CQ9HCJ2 640 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 NINJ2Q9NZG7 142 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 CRYL1Q9Y2S2 319 aa11.21□□□□□ -0.61
NUP50-216ENST00000486184 EP300Q09472 2414 aaPredicted RBP11.21□□□□□ -0.61
NUP50-216ENST00000486184 VPS13AQ96RL7 3174 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 ASCC3Q8N3C0 2202 aaKnown RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 CABIN1Q9Y6J0 2220 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 TCRBV9S1A1TA0A576 114 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 MGAT4DA6NG13 374 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 PDZK1P1A8MUH7 402 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 B4DGG1 531 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 TPP1O14773 563 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 YY2O15391 372 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 TRIM16O95361 564 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 ACSL3O95573 720 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 S1PR4O95977 384 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 ESR1P03372 595 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 TUBBP07437 444 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 CELA2BP08218 269 aaPredicted RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 HALP42357 657 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 RPIAP49247 311 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 PMS2P54278 862 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 DAB2P98082 770 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 MPP1Q00013 466 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 ILF2Q12905 390 aaKnown RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 BOP1Q14137 746 aaKnown RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 ZCCHC8Q6NZY4 707 aaKnown RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 TRMT10CQ7L0Y3 403 aaKnown RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 SLC26A11Q86WA9 606 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 RELL1Q8IUW5 271 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 ZNF547Q8IVP9 402 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 CNTN4Q8IWV2 1026 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 SLC25A45Q8N413 288 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 PNPLA1Q8N8W4 532 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 C2CD4AQ8NCU7 369 aaPredicted RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 OR2L2Q8NH16 312 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 OR4C6Q8NH72 309 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 CCL4L1Q8NHW4 92 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 HM13Q8TCT9 377 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 FBF1Q8TES7 1133 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 ZDHHC1Q8WTX9 485 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 ELMO1Q92556 727 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 LPGAT1Q92604 370 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 CCDC97Q96F63 343 aaPredicted RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 SLC32A1Q9H598 525 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 STN1Q9H668 368 aaKnown RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 RRAGDQ9NQL2 400 aaPredicted RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 MOCS1Q9NZB8 636 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 NCKIPSDQ9NZQ3 722 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 TAAR2Q9P1P5 351 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 SIRPGQ9P1W8 387 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 FTSJ1Q9UET6 329 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 PLEKHM1Q9Y4G2 1056 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 PCYT1BQ9Y5K3 369 aaPredicted RBP11.2□□□□□ -0.62
NUP50-216ENST00000486184 COMMD10Q9Y6G5 202 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 PRSS21Q9Y6M0 314 aa11.2□□□□□ -0.62
NUP50-216ENST00000486184 BPTFQ12830 3046 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 RIF1Q5UIP0 2472 aaKnown RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 C17orf113A0A1B0GUU1 675 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 SNPHO15079 494 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 KPNA5O15131 536 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 APOA4P06727 396 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 SLC35G4P0C7Q5 338 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms