RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 SERPINA4P29622 427 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 CSNK1DP48730 415 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 SUOXP51687 545 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 THOP1P52888 689 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 CLDN6P56747 220 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 DAB2P98082 770 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 SEMG2Q02383 582 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 SLC25A11Q02978 314 aaKnown RBP10.66□□□□□ -0.7
DDX56-212ENST00000485367 RFTN1Q14699 578 aaPredicted RBP10.66□□□□□ -0.7
DDX56-212ENST00000485367 UGP2Q16851 508 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 PROX2Q3B8N5 592 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 TMEM52BQ4KMG9 183 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 TPRG1LQ5T0D9 272 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 ERAP2Q6P179 960 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 C3orf62Q6ZUJ4 267 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 PARGQ86W56 976 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 TTC13Q8NBP0 860 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 RBM15BQ8NDT2 890 aaKnown RBP10.66□□□□□ -0.7
DDX56-212ENST00000485367 DENND6BQ8NEG7 585 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 MTBPQ96DY7 904 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 PANX3Q96QZ0 392 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 NMUR2Q9GZQ4 415 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 STN1Q9H668 368 aaKnown RBP10.66□□□□□ -0.7
DDX56-212ENST00000485367 PCDH18Q9HCL0 1135 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 GPR27Q9NS67 375 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 MKS1Q9NXB0 559 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 SLC17A7Q9P2U7 560 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 SEPT3Q9UH03 358 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 IKBKGQ9Y6K9 419 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 CHD6Q8TD26 2715 aa10.66□□□□□ -0.7
DDX56-212ENST00000485367 WDR91A4D1P6 747 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 MUSKO15146 869 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 CDK4P11802 303 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 JUPP14923 745 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 NME1P15531 152 aaKnown RBP10.65□□□□□ -0.7
DDX56-212ENST00000485367 ZNF24P17028 368 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 STIP1P31948 543 aaKnown RBP10.65□□□□□ -0.7
DDX56-212ENST00000485367 IGFALSP35858 605 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 GJC1P36383 396 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 SCNN1BP51168 640 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 PFN3P60673 137 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 HNRNPKP61978 463 aaKnown RBP eCLIP10.65□□□□□ -0.7
DDX56-212ENST00000485367 BCL2L1Q07817 233 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 NSUN2Q08J23 767 aaKnown RBP eCLIP10.65□□□□□ -0.7
DDX56-212ENST00000485367 SLC10A7Q0GE19 358 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 ZNF235Q14590 738 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 HADHQ16836 314 aaKnown RBP10.65□□□□□ -0.7
DDX56-212ENST00000485367 TFDP3Q5H9I0 405 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 C1orf146Q5VVC0 180 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 BRAT1Q6PJG6 821 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 DHDDSQ86SQ9 333 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 TMPRSS12Q86WS5 348 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 ZSWIM9Q86XI8 627 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 PALM2Q8IXS6 379 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 PDIK1LQ8N165 341 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 NAT8LQ8N9F0 302 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 OR4C6Q8NH72 309 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 SLC35B2Q8TB61 432 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 GFM2Q969S9 779 aaKnown RBP10.65□□□□□ -0.7
DDX56-212ENST00000485367 DGCR14Q96DF8 476 aaKnown RBP10.65□□□□□ -0.7
DDX56-212ENST00000485367 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
DDX56-212ENST00000485367 S100A14Q9HCY8 104 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 MBNL1Q9NR56 388 aaKnown RBP10.65□□□□□ -0.7
DDX56-212ENST00000485367 GALNT8Q9NY28 637 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 COQ6Q9Y2Z9 468 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 ASPMQ8IZT6 3477 aa10.65□□□□□ -0.7
DDX56-212ENST00000485367 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 hCG_1818297A0A087WSY0 165 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 TTC24A2A3L6 582 aaPredicted RBP10.65□□□□□ -0.71
DDX56-212ENST00000485367 TRABD2BA6NFA1 517 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 NEMP2A6NFY4 417 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 H3BM21 787 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 ZZEF1O43149 2961 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 LZTS3O60299 673 aaPredicted RBP10.65□□□□□ -0.71
DDX56-212ENST00000485367 CSF2P04141 144 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 KRT1P04264 644 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 SERPINA6P08185 405 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 ALPPL2P10696 532 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 MYF5P13349 255 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 C6P13671 934 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 JUNDP17535 347 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 RENBPP51606 427 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 CDH6P55285 790 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 MMRN1Q13201 1228 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 PTK2BQ14289 1009 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 IRF4Q15306 451 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 SPOCD1Q6ZMY3 1216 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 SH2D5Q6ZV89 423 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 SPATA24Q86W54 205 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 ATPAF2Q8N5M1 289 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 GLIS1Q8NBF1 620 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 TP53I13Q8NBR0 393 aaPredicted RBP10.65□□□□□ -0.71
DDX56-212ENST00000485367 ZNF548Q8NEK5 533 aaPredicted RBP10.65□□□□□ -0.71
DDX56-212ENST00000485367 LMX1AQ8TE12 382 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 SLC44A1Q8WWI5 657 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 ZNF599Q96NL3 588 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 PSKH2Q96QS6 385 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 YIPF2Q9BWQ6 316 aa10.65□□□□□ -0.71
DDX56-212ENST00000485367 FRMD8Q9BZ67 464 aaPredicted RBP10.65□□□□□ -0.71
DDX56-212ENST00000485367 KLHL4Q9C0H6 718 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms