RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 NXPE1Q8N323 547 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 DNAAF3Q8N9W5 541 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 OR4D9Q8NGE8 314 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 GPR150Q8NGU9 434 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 JPH3Q8WXH2 748 aaPredicted RBP12.06□□□□□ -0.48
MSH5-216ENST00000484309 USP7Q93009 1102 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 PMEPA1Q969W9 287 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 CXorf40BQ96DE9 158 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 CMKLR1Q99788 373 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 RAB6BQ9NRW1 208 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 NLE1Q9NVX2 485 aaPredicted RBP12.06□□□□□ -0.48
MSH5-216ENST00000484309 FOXJ2Q9P0K8 574 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 SLC30A1Q9Y6M5 507 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 XRCC1P18887 633 aaPredicted RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 ARSDP51689 593 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 GFERP55789 205 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 CXADRP78310 365 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 CDH17Q12864 832 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 CCNG2Q16589 344 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 CLPPQ16740 277 aaPredicted RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 DUS1LQ6P1R4 473 aaKnown RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 TMEM71Q6P5X7 295 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 ABRAXAS1Q6UWZ7 409 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 TMEM26Q6ZUK4 368 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 GSTA5Q7RTV2 222 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 LINC00523Q86TU6 105 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 SERPINA9Q86WD7 417 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 LILRA3Q8N6C8 439 aaPredicted RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 UBE2Q2Q8WVN8 375 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 ULK4Q96C45 1275 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 DCUN1D1Q96GG9 259 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 FCRL3Q96P31 734 aaPredicted RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 WWP1Q9H0M0 922 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 KCNF1Q9H3M0 494 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 CPNE5Q9HCH3 593 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 OCIAD1Q9NX40 245 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 AKAP7Q9P0M2 348 aaPredicted RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 CFAP20Q9Y6A4 193 aaKnown RBP12.05□□□□□ -0.48
MSH5-216ENST00000484309 CACNA1GO43497 2377 aa12.05□□□□□ -0.48
MSH5-216ENST00000484309 LILRA5A6NI73 299 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 EFCAB7A8K855 629 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 ERI2A8K979 691 aaKnown RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 AGAP14A8MT82 685 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 C9orf172C9J069 976 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 HGSO14964 777 aaPredicted RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 SGTAO43765 313 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 POLBP06746 335 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 APRTP07741 180 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 FGF3P11487 239 aaPredicted RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 CSTF2P33240 577 aaKnown RBP eCLIP12.04□□□□□ -0.48
MSH5-216ENST00000484309 HALP42357 657 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 MLLT3P42568 568 aaPredicted RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 EPHA4P54764 986 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 BASP1P80723 227 aaKnown RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 DMPKQ09013 629 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 SEMA5AQ13591 1074 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 GPR18Q14330 331 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 TGIF1Q15583 401 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 AGAP9Q5VTM2 703 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 ZFAND4Q86XD8 727 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 FAM129CQ86XR2 697 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 REXO1L1PQ8IX06 675 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 PIANPQ8IYJ0 282 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 SLC35F6Q8N357 371 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 AVL9Q8NBF6 648 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 STYXQ8WUJ0 223 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 RSC1A1Q92681 617 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 TMEM159Q96B96 161 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 RNF31Q96EP0 1072 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 CDKN2AIPNLQ96HQ2 116 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 MS4A14Q96JA4 679 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 COPS8Q99627 209 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 POT1Q9NUX5 634 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 TRMT1Q9NXH9 659 aaKnown RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 ZDHHC3Q9NYG2 299 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 SMARCAL1Q9NZC9 954 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 PAK5Q9P286 719 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 SLC2A6Q9UGQ3 507 aa12.04□□□□□ -0.48
MSH5-216ENST00000484309 SNRNP200O75643 2136 aaKnown RBP12.04□□□□□ -0.48
MSH5-216ENST00000484309 TRBV5-4A0A0C4DH59 114 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 MGAT4DA6NG13 374 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 MROH6A6NGR9 719 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 CFAP99D6REC4 459 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 UBXN7O94888 489 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 SUN1O94901 812 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 RALBP11234 206 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 ATP1B2P14415 290 aaPredicted RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 AMD1P17707 334 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 MSNP26038 577 aaKnown RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 ACRV1P26436 265 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 VPS41P49754 854 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 SRSF6Q13247 344 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms