RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ZW10O43264 779 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 AVILO75366 819 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 SEC31AO94979 1220 aaKnown RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 BRAFP15056 766 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 XRCC1P18887 633 aaPredicted RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 PAMP19021 973 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 SPINK2P20155 84 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 PPARGP37231 505 aaPredicted RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 ARCN1P48444 511 aaKnown RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 CKAP4Q07065 602 aaKnown RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 FASTKD1Q53R41 847 aaKnown RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 IZUMO3Q5VZ72 239 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 HIBCHQ6NVY1 386 aaPredicted RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 RBM44Q6ZP01 1051 aaKnown RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 MICALCLQ6ZW33 695 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 DET1Q7L5Y6 550 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 TAS2R42Q7RTR8 314 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 SLC9B2Q86UD5 537 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 RBM12BQ8IXT5 1001 aaKnown RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 AGGF1Q8N302 714 aaeCLIP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 OR6P1Q8NGX9 317 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 SH3KBP1Q96B97 665 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 TRIM44Q96DX7 344 aaPredicted RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 SIGLEC10Q96LC7 697 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 KRT12Q99456 494 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 ABCG4Q9H172 646 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 LRRN3Q9H3W5 708 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 STN1Q9H668 368 aaKnown RBP15.6■□□□□ 0.09
UPF3A-208ENST00000484246 CATSPERZQ9NTU4 200 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 POT1Q9NUX5 634 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 SAMD15Q9P1V8 674 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 CPNE7Q9UBL6 633 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 ACSL5Q9ULC5 683 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 DNAJC16Q9Y2G8 782 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 MYLKQ15746 1914 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 LILRA5A6NI73 299 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 PDZK1P1A8MUH7 402 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 F8W8V4 182 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 PPM1DO15297 605 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 TP73O15350 636 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 SNX2O60749 519 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 JUPP14923 745 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 TTPAP49638 278 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 PDX1P52945 283 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 EPHA4P54764 986 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 GPLD1P80108 840 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 HHEXQ03014 270 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 RPA4Q13156 261 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 SPIDRQ14159 915 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 NFE2L1Q14494 772 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 SEMA3AQ14563 771 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 WHAMMP3Q1A5X7 153 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 TYSND1Q2T9J0 566 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 FAM83HQ6ZRV2 1179 aaPredicted RBP15.59■□□□□ 0.09
UPF3A-208ENST00000484246 MAATS1Q7Z4T9 603 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 BEND7Q8N7W2 519 aaPredicted RBP15.59■□□□□ 0.09
UPF3A-208ENST00000484246 GPR150Q8NGU9 434 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 SNF8Q96H20 258 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 TRIM51Q9BSJ1 452 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 NAT9Q9BTE0 207 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 EPB41L1Q9H4G0 881 aa15.59■□□□□ 0.09
UPF3A-208ENST00000484246 SCHIP1Q9P0W5 487 aaPredicted RBP15.59■□□□□ 0.09
UPF3A-208ENST00000484246 MARCH4Q9P2E8 410 aaPredicted RBP15.59■□□□□ 0.09
UPF3A-208ENST00000484246 ZCWPW2A0A1B0GU75 182 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 GOLGA8MH3BSY2 632 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 CD3EAPO15446 510 aaKnown RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 B4GAT1O43505 415 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 USP1O94782 785 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 FTH1P02794 183 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 RPLP0P05388 317 aaKnown RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 OGNP20774 298 aaKnown RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 CCKBRP32239 447 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 HALP42357 657 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 TERF1P54274 439 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 CLDN6P56747 220 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 CCL7P80098 99 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 TARDBPQ13148 414 aaKnown RBP eCLIP15.58■□□□□ 0.088e-6■□□□□ 10.7
UPF3A-208ENST00000484246 TUBB2AQ13885 445 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 ISXQ2M1V0 245 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 ANKRD20A4Q4UJ75 823 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 DNAJC21Q5F1R6 531 aaKnown RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 RNF187Q5TA31 235 aaPredicted RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 LRRC6Q86X45 466 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 BBOF1Q8ND07 529 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 GFM1Q96RP9 751 aaKnown RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 TCF12Q99081 682 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 DPYSL5Q9BPU6 564 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 CCM2Q9BSQ5 444 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 TUBB2BQ9BVA1 445 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 NRSN2Q9GZP1 204 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 COG4Q9H9E3 785 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 ZNF624Q9P2J8 865 aaPredicted RBP15.58■□□□□ 0.08
UPF3A-208ENST00000484246 DKK4Q9UBT3 224 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 WDR37Q9Y2I8 494 aa15.58■□□□□ 0.08
UPF3A-208ENST00000484246 PLXNB3Q9ULL4 1909 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 TDRD6O60522 2096 aaKnown RBP15.57■□□□□ 0.08
UPF3A-208ENST00000484246 IGHV1OR21-1A0A087WYE8 117 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 FAM149AA5PLN7 773 aa15.57■□□□□ 0.08
UPF3A-208ENST00000484246 TMX2-CTNND1H3BSU7 103 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms