RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 GLYATL1Q969I3 302 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 PCMTD1Q96MG8 357 aaPredicted RBP10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 SYT11Q9BT88 431 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 TUBB2BQ9BVA1 445 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 NLNQ9BYT8 704 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 ILKAPQ9H0C8 392 aaPredicted RBP10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 ZBTB20Q9HC78 741 aaPredicted RBP10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 C5AR2Q9P296 337 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 TMPRSS11EQ9UL52 423 aa10.63□□□□□ -0.71
SMARCC1-205ENST00000483847 UBA6A0AVT1 1052 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 TLCD2A6NGC4 264 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 ANKRD66B4E2M5 251 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 GPR89AB7ZAQ6 455 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 MASP2O00187 686 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 MFSD11O43934 449 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 SLC4A1P02730 911 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 HLA-DQB2P05538 268 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 KLK3P07288 261 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 PIRTP0C851 137 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 GPR89BP0CG08 455 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 RARAP10276 462 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 RORAP35398 523 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 RRADP55042 308 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 GSDMDP57764 484 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 RPL26P61254 145 aaKnown RBP10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 GALNT3Q14435 633 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 LLGL1Q15334 1064 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 PTCHD3Q3KNS1 767 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 FAM182AQ5T1J6 154 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 HGSNATQ68CP4 663 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 CUZD1Q86UP6 607 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 KMT5CQ86Y97 462 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 ST6GALNAC3Q8NDV1 305 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 NEK11Q8NG66 645 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 CCHCR1Q8TD31 782 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 MAML1Q92585 1016 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 SGSM3Q96HU1 749 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 LRFN5Q96NI6 719 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 NUP85Q9BW27 656 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 PCDH18Q9HCL0 1135 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 PCMTD2Q9NV79 361 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 RBM22Q9NW64 420 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 PSMD13Q9UNM6 376 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 RPL26L1Q9UNX3 145 aaKnown RBP10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 OSGIN2Q9Y236 505 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 PCDHGA10Q9Y5H3 936 aa10.62□□□□□ -0.71
SMARCC1-205ENST00000483847 OR5K3A6NET4 321 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 PRSS44E7EML9 344 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 E2F3O00716 465 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 CDK14O94921 469 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 MMP2P08253 660 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 OTX2P32243 289 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 SERPINB6P35237 376 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 GLRBP48167 497 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 ARCN1P48444 511 aaKnown RBP10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 ZNF165P49910 485 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 PLCL1Q15111 1095 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 RPE65Q16518 533 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 ANO6Q4KMQ2 910 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 ZNF789Q5FWF6 425 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 FKBP15Q5T1M5 1219 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 CDKAL1Q5VV42 579 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 LYPLAL1Q5VWZ2 237 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 IGFL3Q6UXB1 125 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 SPOCD1Q6ZMY3 1216 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 Q6ZS92 163 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 MRGPREQ86SM8 312 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 KCNMB4Q86W47 210 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 SYTL1Q8IYJ3 562 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 TRAM1L1Q8N609 369 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 CPT1BQ92523 772 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 CLIP3Q96DZ5 547 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 CD180Q99467 661 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 ZSCAN5AQ9BUG6 496 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 TLR10Q9BXR5 811 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 ZNF552Q9H707 407 aaPredicted RBP10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 ZFYVE1Q9HBF4 777 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 LATS2Q9NRM7 1088 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 HRASLS2Q9NWW9 162 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 CSAG2Q9Y5P2 127 aa10.61□□□□□ -0.71
SMARCC1-205ENST00000483847 MATN3O15232 486 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 VEGFDO43915 354 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 ZBTB11O95625 1053 aaPredicted RBP10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 CD48P09326 243 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 ATP1A3P13637 1013 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 CA4P22748 312 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 CES1P23141 567 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 PCK1P35558 622 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 CD86P42081 329 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 HALP42357 657 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 KPNA2P52292 529 aaKnown RBP10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 PER3P56645 1201 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 DCDC1P59894 354 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 GALNT2Q10471 571 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 MYBPC3Q14896 1274 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 NCF4Q15080 339 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 BOLA3Q53S33 107 aa10.6□□□□□ -0.71
SMARCC1-205ENST00000483847 DUS1LQ6P1R4 473 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms