RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 FBXO32Q969P5 355 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 HDAC10Q969S8 669 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 TM9SF2Q99805 663 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 MAGEH1Q9H213 219 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 SPAG4Q9NPE6 437 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 MARCH2Q9P0N8 246 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
LINC00477-201ENST00000483544 NOD1Q9Y239 953 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 POLHQ9Y253 713 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 NDUFAF1Q9Y375 327 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 PCDHGA7Q9Y5G6 932 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 TTC3P53804 2025 aa12.35□□□□□ -0.43
LINC00477-201ENST00000483544 J3KR12 359 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 TRIM24O15164 1050 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CFLARO15519 480 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 SRP72O76094 671 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CRTAMO95727 393 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 NDST3O95803 873 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 HMGN1P05114 100 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ITGB1P05556 798 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ITIH1P19827 911 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 GSTM2P28161 218 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 TPTEP56180 551 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 MRPS22P82650 360 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 RHDQ02161 417 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 DSC2Q02487 901 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 GRIK2Q13002 908 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ZNF235Q14590 738 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 TYSND1Q2T9J0 566 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 REP15Q6BDI9 236 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 FBXL22Q6P050 247 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 C8orf82Q6P1X6 216 aaPredicted RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 LARP4Q71RC2 724 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ISCA2Q86U28 154 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 FAM109AQ8N4B1 249 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PBXIP1Q96AQ6 731 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 C12orf43Q96C57 262 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PABPC5Q96DU9 382 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 NRBF2Q96F24 287 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 HOPXQ9BPY8 73 aaPredicted RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ATXN3LQ9H3M9 355 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 MUC13Q9H3R2 512 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ELAC1Q9H777 363 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 SACM1LQ9NTJ5 587 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CACNA2D2Q9NY47 1150 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ATP6V1HQ9UI12 483 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 WBP11Q9Y2W2 641 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 MTF2Q9Y483 593 aaPredicted RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 VWA8A3KMH1 1905 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CCRL2O00421 344 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CD3EAPO15446 510 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PDPK1O15530 556 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CA12O43570 354 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 NRP2O60462 931 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 RNGTTO60942 597 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 NTRK1P04629 796 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 JUNP05412 331 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 SERPINF2P08697 491 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 HAPLN1P10915 354 aaPredicted RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 HNRNPLP14866 589 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 IL10P22301 178 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 KRT20P35900 424 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PGFP49763 221 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 FOXM1Q08050 763 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ELAVL2Q12926 359 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 MRPL28Q13084 256 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ZNF846Q147U1 533 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 AGKQ53H12 422 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 IGSF11Q5DX21 431 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PTAR1Q7Z6K3 402 aaPredicted RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PSMG2Q969U7 264 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 PPP1R36Q96LQ0 422 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 UHRF1Q96T88 793 aaPredicted RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 AARSD1Q9BTE6 412 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 SLA2Q9H6Q3 261 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CPNE5Q9HCH3 593 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CATSPERZQ9NTU4 200 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 SLC39A1Q9NY26 324 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 ADA2Q9NZK5 511 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 TMEM181Q9P2C4 612 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 CD300AQ9UGN4 299 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 KLF15Q9UIH9 416 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 EIF3LQ9Y262 564 aaKnown RBP12.34□□□□□ -0.43
LINC00477-201ENST00000483544 AP4B1Q9Y6B7 739 aa12.34□□□□□ -0.43
LINC00477-201ENST00000483544 TCRBV3S1A0A5B6 114 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 H7C4K7 107 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 MRASO14807 208 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 MATN4O95460 622 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 CAPN1P07384 714 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 CD1DP15813 335 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 DCKP27707 260 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 SLC7A1P30825 629 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 HSD17B2P37059 387 aa12.33□□□□□ -0.44
LINC00477-201ENST00000483544 ERFP50548 548 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms