RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 C3orf30Q96M34 536 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 IL17FQ96PD4 163 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 C1QTNF5Q9BXJ0 243 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 ZNF556Q9HAH1 456 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 SLC28A3Q9HAS3 691 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 TJP1Q07157 1748 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 CCDC168Q8NDH2 2452 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 MYO5BQ9ULV0 1848 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 FAM237BA0A1B0GVD1 139 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 MAGEA13PA6NCF6 341 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 GOLGA6L9A6NEM1 432 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 PGPEP1LA6NFU8 196 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 VCYO14598 125 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 HNRNPCL1O60812 293 aaKnown RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 NDUFS3O75489 264 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 RFPL2O75678 378 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 SLC25A12O75746 678 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 ZNF432O94892 652 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 DDX58O95786 925 aaKnown RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 FTCDO95954 541 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 EIF2S1P05198 315 aaKnown RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 CLCNKAP51800 687 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 SETQ01105 290 aaPredicted RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 CEBPZQ03701 1054 aaKnown RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 TNFAIP1Q13829 316 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 MED22Q15528 200 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 OASLQ15646 514 aaKnown RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 ZNF718Q3SXZ3 478 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 ZNF672Q499Z4 452 aaPredicted RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 SETMARQ53H47 684 aaPredicted RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 CCDC30Q5VVM6 783 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 WBP2NLQ6ICG8 309 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 NCEH1Q6PIU2 408 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 CCNI2Q6ZMN8 369 aaPredicted RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 FOXP4Q8IVH2 680 aaPredicted RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 ARHGAP12Q8IWW6 846 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 WFIKKN2Q8TEU8 576 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 NR4A3Q92570 626 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 SGCDQ92629 289 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 ARHGEF2Q92974 986 aaKnown RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 RRNAD1Q96FB5 475 aaKnown RBP3.62□□□□□ -1.83
COPA-204ENST00000481522 PERPQ96FX8 193 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 CSF3RQ99062 836 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 PCGF1Q9BSM1 259 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 MUC13Q9H3R2 512 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 GAREM1Q9H706 876 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 RRP7BPQ9NSQ0 103 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 SMARCAL1Q9NZC9 954 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 ZNF224Q9NZL3 707 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 SIX4Q9UIU6 781 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 TINAGQ9UJW2 476 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 VDAC3Q9Y277 283 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 PCDHAC2Q9Y5I4 1007 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 PSAT1Q9Y617 370 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 PIAS3Q9Y6X2 628 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 MAU2Q9Y6X3 613 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 KAT6BQ8WYB5 2073 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 ITIH6Q6UXX5 1313 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 KMT2EQ8IZD2 1858 aa3.62□□□□□ -1.83
COPA-204ENST00000481522 BCL9O00512 1426 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 OTOGLQ3ZCN5 2332 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 A0A1W2PQF6 199 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 LIPT2A6NK58 231 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 PRSS47A8MTI9 375 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 USO1O60763 962 aaKnown RBP3.61□□□□□ -1.83
COPA-204ENST00000481522 RNASEH2AO75792 299 aaKnown RBP3.61□□□□□ -1.83
COPA-204ENST00000481522 KDM4BO94953 1096 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 CLDN14O95500 239 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 PMS2P2O95744 297 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 MLYCDO95822 493 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 LAMP2P13473 410 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 CDH2P19022 906 aaPredicted RBP3.61□□□□□ -1.83
COPA-204ENST00000481522 BDKRB2P30411 391 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 HOXC9P31274 260 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 RBMXP38159 391 aaKnown RBP3.61□□□□□ -1.83
COPA-204ENST00000481522 GEMIN4P57678 1058 aaKnown RBP3.61□□□□□ -1.83
COPA-204ENST00000481522 NLRP5P59047 1200 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 DCAF7P61962 342 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 ZBED6P86452 979 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 NIPAL4Q0D2K0 466 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 MAMLD1Q13495 774 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 PAPPA-AS1Q5QFB9 102 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 UNQ6126/PRO20091Q6UXV3 157 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 C1orf122Q6ZSJ8 110 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 DPPA4Q7L190 304 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 EXOC3L1Q86VI1 746 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 SFR1Q86XK3 245 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 FOXRED2Q8IWF2 684 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 NGEFQ8N5V2 710 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 POMGNT1Q8WZA1 660 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 RND1Q92730 232 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 ACOX2Q99424 681 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 KCNN2Q9H2S1 579 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 POLR1BQ9H9Y6 1135 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 RANGRFQ9HD47 186 aaPredicted RBP3.61□□□□□ -1.83
COPA-204ENST00000481522 MMP25Q9NPA2 562 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 ACSS1Q9NUB1 689 aaPredicted RBP3.61□□□□□ -1.83
COPA-204ENST00000481522 MCM9Q9NXL9 1143 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 C1RLQ9NZP8 487 aa3.61□□□□□ -1.83
COPA-204ENST00000481522 CNOT8Q9UFF9 292 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms