RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, human

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-208	ENST00000480340	ALDH3B2	P48448	385 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	CSNK1D	P48730	415 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	CDK9	P50750	372 aa	Known RBP	13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ST8SIA6	P61647	398 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	SPIDR	Q14159	915 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ARMC12	Q5T9G4	340 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	SLC15A3	Q8IY34	581 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	VPS50	Q96JG6	964 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	SLC29A1	Q99808	456 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ADGRE3	Q9BY15	652 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ZNF385D	Q9H6B1	395 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ATP13A3	Q9H7F0	1226 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	LIMD1	Q9UGP4	676 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	SPO11	Q9Y5K1	396 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ARL5A	Q9Y689	179 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	MUC22	E2RYF6	1773 aa	Predicted RBP	13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340		A0A0U1RQS6	177 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ANKRD66	B4E2M5	251 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	MATN2	O00339	956 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	GRID2	O43424	1007 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	CTPS1	P17812	591 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	ME2	P23368	584 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	MAGEA12	P43365	314 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	MAPK8	P45983	427 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	RECQL	P46063	649 aa	Predicted RBP	13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	NAA20	P61599	178 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	PTPRCAP	Q14761	206 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	METTL21C	Q5VZV1	264 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	LPCAT2	Q7L5N7	544 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	PGAM4	Q8N0Y7	254 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	MYO1H	Q8N1T3	1032 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	TRIML2	Q8N7C3	387 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	OR2A12	Q8NGT7	310 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	RP9	Q8TA86	221 aa	Known RBP	13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	FRS2	Q8WU20	508 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	LRTOMT	Q8WZ04	291 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	CNDP1	Q96KN2	507 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	GUCD1	Q96NT3	240 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	RANBP9	Q96S59	729 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	PCDHAC1	Q9H158	963 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	CAAP1	Q9H8G2	361 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	SLC8A2	Q9UPR5	921 aa		13.97	□□□□□ -0.17
DENND4B-208	ENST00000480340	CCL22	O00626	93 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	AURKA	O14965	403 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	FZD6	O60353	706 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	PGLS	O95336	258 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	SRPRA	P08240	638 aa	Known RBP	13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	TFPT	P0C1Z6	253 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	SERPINA4	P29622	427 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	GP5	P40197	560 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	RELA	Q04206	551 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	FNDC3B	Q53EP0	1204 aa	Known RBP	13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	FSTL4	Q6MZW2	842 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	DEFB123	Q8N688	67 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	CSGALNACT1	Q8TDX6	532 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	GIPC3	Q8TF64	312 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	PTCD2	Q8WV60	388 aa	Known RBP	13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	EME1	Q96AY2	570 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	OSBPL6	Q9BZF3	934 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	OLAH	Q9NV23	265 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	SPATA7	Q9P0W8	599 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	ZDHHC2	Q9UIJ5	367 aa		13.96	□□□□□ -0.17
DENND4B-208	ENST00000480340	TK2	O00142	265 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	LDB2	O43679	373 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	KAT7	O95251	611 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	VAPB	O95292	243 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	POP4	O95707	220 aa	Known RBP	13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	UGT2B4	P06133	528 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	HLA-E	P13747	358 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	RAB15	P59190	212 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	PFKP	Q01813	784 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	RAD51	Q06609	339 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	CCDC153	Q494R4	210 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	TSTD2	Q5T7W7	516 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	KCNMB4	Q86W47	210 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	CARM1	Q86X55	608 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	FAM110B	Q8TC76	370 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	BRSK1	Q8TDC3	778 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	VOPP1	Q96AW1	172 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	RBBP8	Q99708	897 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	MRM3	Q9HC36	420 aa	Known RBP	13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340	EBF1	Q9UH73	591 aa		13.96	□□□□□ -0.18
DENND4B-208	ENST00000480340		A0A096LPK6	155 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	HTR3E	A5X5Y0	456 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	TRIM13	O60858	407 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	ALPI	P09923	528 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	SBK3	P0C264	359 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	TXNL4A	P83876	142 aa	Known RBP	13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	PDAP1	Q13442	181 aa	Known RBP	13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	C16orf72	Q14CZ0	275 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	FAM219B	Q5XKK7	198 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	CLEC14A	Q86T13	490 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	MDGA1	Q8NFP4	955 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	PIH1D2	Q8WWB5	315 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	HLA-C	Q95604	372 aa		13.95	□□□□□ -0.18
DENND4B-208	ENST00000480340	ERLEC1	Q96DZ1	483 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms