RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 C17orf113A0A1B0GUU1 675 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 A6NCN8 305 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 MGAT4DA6NG13 374 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 NOBOXO60393 691 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 RPS3P23396 243 aaKnown RBP eCLIP19.41■□□□□ 0.72e-11■■□□□ 11.8
LIME1-205ENST00000480139 ACP1P24666 158 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 ADARP55265 1226 aaKnown RBP19.41■□□□□ 0.7
LIME1-205ENST00000480139 FASTKD3Q14CZ7 662 aaKnown RBP19.41■□□□□ 0.7
LIME1-205ENST00000480139 NR0B2Q15466 257 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 PLA2G4EQ3MJ16 856 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 WASH2PQ6VEQ5 465 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 KCNMB4Q86W47 210 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 SLC35F3Q8IY50 421 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 CLDN19Q8N6F1 224 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 OTUD6BQ8N6M0 293 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 KYQ8NBH2 561 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 ZDHHC1Q8WTX9 485 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 CERS2Q96G23 380 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 WASH6PQ9NQA3 447 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 INTS10Q9NVR2 710 aaKnown RBP19.41■□□□□ 0.7
LIME1-205ENST00000480139 TBC1D29Q9UFV1 150 aa19.41■□□□□ 0.7
LIME1-205ENST00000480139 DCDC2BA2VCK2 349 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 B4DGG1 531 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 GOLGA8KD6RF30 607 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 GOLGA8TH3BQL2 631 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 PRMT5O14744 637 aaPredicted RBP19.4■□□□□ 0.7
LIME1-205ENST00000480139 OR1I1O60431 355 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 NDUFS3O75489 264 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 FTH1P02794 183 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 OR56A5P0C7T3 313 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 F3P13726 295 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 SLC2A4P14672 509 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 IDSP22304 550 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 CUL1Q13616 776 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 C14orf28Q4W4Y0 310 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 HP1BP3Q5SSJ5 553 aaPredicted RBP19.4■□□□□ 0.7
LIME1-205ENST00000480139 AGAP9Q5VTM2 703 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 ZNF470Q6ECI4 717 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 CEP128Q6ZU80 1094 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 LDB1Q86U70 411 aaPredicted RBP19.4■□□□□ 0.7
LIME1-205ENST00000480139 ANKMY2Q8IV38 441 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 CNTN4Q8IWV2 1026 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 BEND7Q8N7W2 519 aaPredicted RBP19.4■□□□□ 0.7
LIME1-205ENST00000480139 OR6C4Q8NGE1 309 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 HM13Q8TCT9 377 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 PYROXD1Q8WU10 500 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 CCM2Q9BSQ5 444 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 TSPYL1Q9H0U9 437 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 P2RY12Q9H244 342 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 SAYSD1Q9NPB0 183 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 IL1RAPL1Q9NZN1 696 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 GULP1Q9UBP9 304 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 PRSS21Q9Y6M0 314 aa19.4■□□□□ 0.7
LIME1-205ENST00000480139 EME2A4GXA9 379 aaPredicted RBP19.39■□□□□ 0.69
LIME1-205ENST00000480139 OR5K4A6NMS3 321 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 DKK1O94907 266 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 ACADVLP49748 655 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 DAB2P98082 770 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 ILKQ13418 452 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 HLTFQ14527 1009 aaKnown RBP eCLIP19.39■□□□□ 0.69
LIME1-205ENST00000480139 ZNF658BQ4V348 819 aaPredicted RBP19.39■□□□□ 0.69
LIME1-205ENST00000480139 HSP90AA5PQ58FG0 334 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 METRNLQ641Q3 311 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 ABRAXAS1Q6UWZ7 409 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 NAGSQ8N159 534 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 PNPLA1Q8N8W4 532 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 LRRN4CLQ8ND94 238 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 GSDMBQ8TAX9 411 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 LPGAT1Q92604 370 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 NAT6Q93015 286 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 CFAP36Q96G28 342 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 OSGEPL1Q9H4B0 414 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 TOR4AQ9NXH8 423 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 SIRPGQ9P1W8 387 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 MTRF1LQ9UGC7 380 aaKnown RBP19.39■□□□□ 0.69
LIME1-205ENST00000480139 GNPTGQ9UJJ9 305 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 ACSL5Q9ULC5 683 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 DNAJC16Q9Y2G8 782 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 PCDHB1Q9Y5F3 818 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 PCDHGA1Q9Y5H4 931 aa19.39■□□□□ 0.69
LIME1-205ENST00000480139 CNOT1A5YKK6 2376 aaKnown RBP19.39■□□□□ 0.69
LIME1-205ENST00000480139 KIR2DS5A0A0G2JLQ3 304 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 A0A0G2JNG1 304 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 KIR2DS3K7RE56 304 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 GIPC1O14908 333 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 EML2O95834 649 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 S1PR4O95977 384 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 GP1BAP07359 652 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 GSTA2P09210 222 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 CDK4P11802 303 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 SLC1A2P43004 574 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 TUBB4BP68371 445 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 SIM1P81133 766 aaPredicted RBP19.38■□□□□ 0.69
LIME1-205ENST00000480139 KIR2DS5Q14953 304 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 ZNF449Q6P9G9 518 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 IYDQ6PHW0 289 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 XKR5Q6UX68 686 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 KIAA0408Q6ZU52 694 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 GALNT7Q86SF2 657 aa19.38■□□□□ 0.69
LIME1-205ENST00000480139 IFT20Q8IY31 132 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms