RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TMEM51Q9NW97 253 aa11.56□□□□□ -0.56
USP11-208ENST00000480104 LUC7L2Q9Y383 392 aaKnown RBP11.56□□□□□ -0.56
USP11-208ENST00000480104 FAM90A27PA6NNH2 459 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 WASH4PA8MWX3 477 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 PRAMEF11O60813 436 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 RASAL1O95294 804 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 SIX3O95343 332 aaPredicted RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 HOXD4P09016 255 aaPredicted RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 CYP2A6P11509 494 aaPredicted RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 FMO5P49326 533 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 YBEYP58557 167 aaPredicted RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 PMP22Q01453 160 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 ADCY2Q08462 1091 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 DEFB113Q30KQ7 82 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 AGAP11Q8TF27 550 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 PTERQ96BW5 349 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 THOC3Q96J01 351 aaKnown RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 PPM1MQ96MI6 270 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 LMF1Q96S06 567 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 C17orf62Q9BQA9 187 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 GPATCH1Q9BRR8 931 aaKnown RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 RIOK2Q9BVS4 552 aaKnown RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 CLEC4MQ9H2X3 399 aaPredicted RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 RMI1Q9H9A7 625 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 PLA2G3Q9NZ20 509 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 COQ3Q9NZJ6 369 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 GPN3Q9UHW5 284 aaPredicted RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 CNOT6Q9ULM6 557 aaKnown RBP11.55□□□□□ -0.56
USP11-208ENST00000480104 PPT2Q9UMR5 302 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 EDARQ9UNE0 448 aa11.55□□□□□ -0.56
USP11-208ENST00000480104 DYTNA2CJ06 578 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 SOCS6O14544 535 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 ADAM10O14672 748 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 SLC16A3O15427 465 aaKnown RBP11.54□□□□□ -0.56
USP11-208ENST00000480104 PMPCBO75439 489 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 PYGLP06737 847 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 CBSLP0DN79 551 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 RPL10P27635 214 aaKnown RBP11.54□□□□□ -0.56
USP11-208ENST00000480104 CBSP35520 551 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 SCNN1BP51168 640 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 AP1S1P61966 158 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 SLC9A5Q14940 896 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 FOXD4L6Q3SYB3 417 aaPredicted RBP11.54□□□□□ -0.56
USP11-208ENST00000480104 FAM102AQ5T9C2 384 aaPredicted RBP11.54□□□□□ -0.56
USP11-208ENST00000480104 C1orf189Q5VU69 101 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 KLHL35Q6PF15 583 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 PAMR1Q6UXH9 720 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 FOXD4L3Q6VB84 417 aaPredicted RBP11.54□□□□□ -0.56
USP11-208ENST00000480104 ZDHHC17Q8IUH5 632 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 CIARTQ8N365 385 aaPredicted RBP11.54□□□□□ -0.56
USP11-208ENST00000480104 TMEM158Q8WZ71 300 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 DMRTA2Q96SC8 542 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 STMN3Q9NZ72 180 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 SLC23A2Q9UGH3 650 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 CDYLQ9Y232 598 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 DNAJC16Q9Y2G8 782 aa11.54□□□□□ -0.56
USP11-208ENST00000480104 C17orf113A0A1B0GUU1 675 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 TTC24A2A3L6 582 aaPredicted RBP11.53□□□□□ -0.56
USP11-208ENST00000480104 ZNF749O43361 778 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
USP11-208ENST00000480104 NUAK1O60285 661 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 PALMO75781 387 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 MTA2O94776 668 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 TOXO94900 526 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 F10P00742 488 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 PYGMP11217 842 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 DRG2P55039 364 aaKnown RBP11.53□□□□□ -0.56
USP11-208ENST00000480104 SNX16P57768 344 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 ATP11AP98196 1134 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 LRRC66Q68CR7 880 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 CRTC3Q6UUV7 619 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 CHSY3Q70JA7 882 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 TAB3Q8N5C8 712 aaPredicted RBP11.53□□□□□ -0.56
USP11-208ENST00000480104 GPR150Q8NGU9 434 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 PWWP2AQ96N64 755 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 MCCC1Q96RQ3 725 aaPredicted RBP11.53□□□□□ -0.56
USP11-208ENST00000480104 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
USP11-208ENST00000480104 UCK2Q9BZX2 261 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 IFT80Q9P2H3 777 aaPredicted RBP11.53□□□□□ -0.56
USP11-208ENST00000480104 TRIM10Q9UDY6 481 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 NDOR1Q9UHB4 597 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 ADGRG1Q9Y653 693 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 CCDC88CQ9P219 2028 aa11.53□□□□□ -0.56
USP11-208ENST00000480104 HCFC1P51610 2035 aa11.52□□□□□ -0.56
USP11-208ENST00000480104 FAM237BA0A1B0GVD1 139 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 FAM170AA1A519 330 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 OR5K3A6NET4 321 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 SLC9B1P1A6NJY1 282 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 E9PLN8 166 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 H7C1Q1 480 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 ZNHIT1O43257 154 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 GADD45BO75293 160 aaPredicted RBP11.52□□□□□ -0.57
USP11-208ENST00000480104 ZNF30P17039 623 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 ZNF8P17098 575 aaPredicted RBP11.52□□□□□ -0.57
USP11-208ENST00000480104 CTPS1P17812 591 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 MMP11P24347 488 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 EPHB2P29323 1055 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 INSCQ1MX18 579 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 TDRD12Q587J7 1177 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms