RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 EI24O14681 340 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 TLR5O60602 858 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 FGF19O95750 216 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 APOC1P02654 83 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 IFNA6P05013 189 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 NR2C1P13056 603 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 PORP16435 677 aaPredicted RBP6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 CCNFP41002 786 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 TAS2R43P59537 309 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 SWI5Q1ZZU3 235 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 SETMARQ53H47 684 aaPredicted RBP6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 SLC30A10Q6XR72 485 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 CLHC1Q8NHS4 586 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 ADAMTS15Q8TE58 950 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 APOLD1Q96LR9 279 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 IFT27Q9BW83 186 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 TRIT1Q9H3H1 467 aaKnown RBP6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 TRMT13Q9NUP7 481 aaKnown RBP6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 TBC1D14Q9P2M4 693 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 MKL2Q9ULH7 1088 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 B3GNT3Q9Y2A9 372 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 SLC27A6Q9Y2P4 619 aa6.09□□□□□ -1.44
PRPF4B-205ENST00000480058 A0A1B0GVM2 712 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 FABP12A6NFH5 140 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TCAF2A6NFQ2 919 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ACOX3O15254 700 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A9O60656 530 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 APOL3O95236 402 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 DLDP09622 509 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 COL6A1P12109 1028 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 EPCAMP16422 314 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A6P19224 532 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A1P22309 533 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A4P22310 534 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 F8A1P23610 371 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A3P35503 534 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 GSK3BP49841 420 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 THOP1P52888 689 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PLCL1Q15111 1095 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 DLG2Q15700 870 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ZNF767PQ75MW2 155 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SPPL2CQ8IUH8 684 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 OR8H1Q8NGG4 311 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TNFAIP8L1Q8WVP5 186 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ELMO1Q92556 727 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SIGLEC10Q96LC7 697 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 KCTD7Q96MP8 289 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TSSK3Q96PN8 268 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PHF12Q96QT6 1004 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 VRTNQ9H8Y1 702 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A7Q9HAW7 530 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A10Q9HAW8 530 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 UGT1A8Q9HAW9 530 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SPEF1Q9Y4P9 236 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PCDHGA3Q9Y5H0 932 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TEX264Q9Y6I9 313 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 EFCAB9A8MZ26 197 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ACSL1P33121 698 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 RORAP35398 523 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CLK3P49761 638 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ATN1P54259 1190 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 HERVK_113P63132 956 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PIGGQ5H8A4 983 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 WSCD1Q658N2 575 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 AHSA2Q719I0 299 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TFAP2DQ7Z6R9 452 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CANT1Q8WVQ1 401 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 GAD1Q99259 594 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ERVK-6Q9BXR3 956 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 POLR2J3Q9H1A7 115 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CCM2LQ9NUG4 571 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 DTLQ9NZJ0 730 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TSR3Q9UJK0 312 aaKnown RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MEMO1Q9Y316 297 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SNX8Q9Y5X2 465 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PTPRAP18433 802 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 KLRC2P26717 231 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 CDC25CP30307 473 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 NSG1P42857 185 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MAGEA2P43356 314 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SGCGQ13326 291 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 SLC9A4Q6AI14 798 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 EPGNQ6UW88 154 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 GK5Q6ZS86 529 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MSANTD1Q6ZTZ1 278 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TTLQ8NG68 377 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PIGXQ8TBF5 258 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MECRQ9BV79 373 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 GSDMCQ9BYG8 508 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 BTBD1Q9H0C5 482 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 HHATLQ9HCP6 504 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 PREBQ9HCU5 417 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ACP6Q9NPH0 428 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MANSC4A6NHS7 340 aaPredicted RBP6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TTLL13PA6NNM8 815 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 RIIAD1A6NNX1 92 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 MAGEB17A8MXT2 336 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 ZNF879B4DU55 563 aa6.08□□□□□ -1.44
PRPF4B-205ENST00000480058 TFECO14948 347 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms