RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 OSGIN2Q9Y236 505 aa16.95■□□□□ 0.3
HMGN1-212ENST00000479586 UBA6A0AVT1 1052 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-212ENST00000479586 RGSL1A5PLK6 1076 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 DDX3YO15523 660 aaKnown RBP16.94■□□□□ 0.3
HMGN1-212ENST00000479586 TCF4P15884 667 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 RORAP35398 523 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 RPL26P61254 145 aaKnown RBP16.94■□□□□ 0.3
HMGN1-212ENST00000479586 NIPAL4Q0D2K0 466 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 ABRQ12979 859 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 ZXDCQ2QGD7 858 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-212ENST00000479586 KHDC1Q4VXA5 237 aaKnown RBP16.94■□□□□ 0.3
HMGN1-212ENST00000479586 GPR26Q8NDV2 337 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 ARRDC2Q8TBH0 407 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 CPT1BQ92523 772 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 HSPH1Q92598 858 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 GLYATL1Q969I3 302 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 ZNF653Q96CK0 615 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 RPL26L1Q9UNX3 145 aaKnown RBP16.94■□□□□ 0.3
HMGN1-212ENST00000479586 SVILO95425 2214 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 MED13LQ71F56 2210 aa16.94■□□□□ 0.3
HMGN1-212ENST00000479586 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 CA4P22748 312 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 OTX2P32243 289 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 LLGL1Q15334 1064 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 KLHL35Q6PF15 583 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 FBXO38Q6PIJ6 1188 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 IGFL3Q6UXB1 125 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 C11orf96Q7Z7L8 435 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 OR8K5Q8NH50 307 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 CLIP3Q96DZ5 547 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 PPM1MQ96MI6 270 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 CD180Q99467 661 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 ZBTB20Q9HC78 741 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-212ENST00000479586 LATS2Q9NRM7 1088 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.93■□□□□ 0.3
HMGN1-212ENST00000479586 PCMTD2Q9NV79 361 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 TMEM63CQ9P1W3 806 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 SEC16AO15027 2179 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 ZGRF1Q86YA3 2104 aa16.93■□□□□ 0.3
HMGN1-212ENST00000479586 OR5K3A6NET4 321 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 E2F3O00716 465 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 CDK14O94921 469 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 LCA5LO95447 670 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 SLC4A1P02730 911 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 ALPPP05187 535 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 SERPINB6P35237 376 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 HALP42357 657 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 MYBPC3Q14896 1274 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 PLCL1Q15111 1095 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 PTCHD3Q3KNS1 767 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 ANO6Q4KMQ2 910 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 Q6ZS92 163 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 MRGPREQ86SM8 312 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 KCNMB4Q86W47 210 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 SYTL1Q8IYJ3 562 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 MAML1Q92585 1016 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 ZSCAN5AQ9BUG6 496 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 NUP85Q9BW27 656 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 TLR10Q9BXR5 811 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 ZNF552Q9H707 407 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-212ENST00000479586 AGPAT4Q9NRZ5 378 aa16.92■□□□□ 0.3
HMGN1-212ENST00000479586 RBM22Q9NW64 420 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■□□□ 11.7
HMGN1-212ENST00000479586 ANKRD66B4E2M5 251 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 MASP2O00187 686 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 ZBTB11O95625 1053 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-212ENST00000479586 HLA-DQB2P05538 268 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 ATP1A3P13637 1013 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 CES1P23141 567 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 ZNF165P49910 485 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 DCDC1P59894 354 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 NCF4Q15080 339 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 KRT31Q15323 416 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 RPE65Q16518 533 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 TMTC4Q5T4D3 741 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 TXNRD3NBQ6F5E7 133 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 SPOCD1Q6ZMY3 1216 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 RAB43Q86YS6 212 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 GALNT16Q8N428 558 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 ZADH2Q8N4Q0 377 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 TRAM1L1Q8N609 369 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 LURAP1Q96LR2 239 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 RUBCNLQ9H714 662 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 PCDH18Q9HCL0 1135 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 HRASLS2Q9NWW9 162 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 SOHLH2Q9NX45 425 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 ITGB1BP2Q9UKP3 347 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 CSAG2Q9Y5P2 127 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 PKDREJQ9NTG1 2253 aa16.91■□□□□ 0.3
HMGN1-212ENST00000479586 HEATR9A2RTY3 570 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 VEGFDO43915 354 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 MFSD11O43934 449 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 PIRTP0C851 137 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 RARAP10276 462 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 ITGA3P26006 1051 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 ARCN1P48444 511 aaKnown RBP16.9■□□□□ 0.3
HMGN1-212ENST00000479586 KPNA2P52292 529 aaKnown RBP16.9■□□□□ 0.3
HMGN1-212ENST00000479586 GALNT3Q14435 633 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 KRTAP21-3Q3LHN1 58 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 FKBP15Q5T1M5 1219 aa16.9■□□□□ 0.3
HMGN1-212ENST00000479586 TRAPPC5Q8IUR0 188 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms